PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
POcom680112670 Flavonoid F3H medium borderline
POcom680112680 Flavonoid F3H medium borderline
POcom700117940 Flavonoid F3H medium borderline
POcom700117960 Flavonoid F3H medium borderline
POcom710121250 Flavonoid F3H low borderline
POcom720123200 Flavonoid F3H medium borderline
POcom720123230 Flavonoid F3H medium borderline
POcom807660140460 Flavonoid F3H medium borderline
POcom810810145700 Flavonoid F3H medium borderline
POcom812270149640 Flavonoid F3H medium borderline
POcom813390156940 Flavonoid F3H medium borderline
POcom813660160640 Flavonoid F3H medium borderline
POcom813870162730 Flavonoid F3H medium borderline
POcom813980164050 Flavonoid F3H medium borderline
POcom815590186940 Flavonoid F3H medium borderline
POcom816140194140 Flavonoid F3H medium borderline
POcom816190195420 Flavonoid F3H medium borderline
POcom816320196230 Flavonoid F3H medium pass
POcom816320196280 Flavonoid F3H medium borderline
POcom816550197870 Flavonoid F3H medium borderline
POcom817150207980 Flavonoid F3H medium borderline
POcom817250211170 Flavonoid F3H medium borderline
POcom817500218450 Flavonoid F3H medium borderline
POcom817500218460 Flavonoid F3H medium borderline
POcom817500218470 Flavonoid F3H medium borderline
POcom817680222540 Flavonoid F3H medium borderline
POcom817680222560 Flavonoid F3H medium borderline
POcom817850226830 Flavonoid F3H medium borderline
POcom818040234470 Flavonoid F3H low borderline
POcom818080236370 Flavonoid F3H low borderline
POcom820238450 Flavonoid F3H medium borderline
POcom840240670 Flavonoid F3H medium borderline
POcom950252350 Flavonoid F3H medium borderline
POcom980256510 Flavonoid F3H medium borderline
POcom980256520 Flavonoid F3H low borderline
POcom607310101320 Flavonoid FLS medium borderline
POcom820238270 Flavonoid FLS medium borderline
POcom1420020130 Flavonoid FNS medium borderline
POcom1640024930 Flavonoid FNS medium borderline
POcom2340053520 Flavonoid FNS medium borderline
POcom2610080820 Flavonoid FNS medium borderline
POcom2670088110 Flavonoid FNS medium borderline
POcom2670089880 Flavonoid FNS low borderline
POcom640102950 Flavonoid FNS medium borderline
POcom710119610 Flavonoid FNS low borderline
POcom810570145390 Flavonoid FNS medium borderline
POcom814350170000 Flavonoid FNS medium borderline
POcom814700174830 Flavonoid FNS medium borderline
POcom815010177500 Flavonoid FNS medium borderline
POcom815560184870 Flavonoid FNS medium borderline