PlantSME Plant secondary metabolism enzyme database

Polytrichum commune (polytrichum_commune)

Imported from atlas release summary for Polytrichum commune.

606
Family-Level Assignments
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Phenylpropanoid pathway 153 11 POD (64) View species results
Terpenoid pathway 151 18 BAHD (58) View species results
Alkaloid pathway 128 16 NMT (20) View species results
Flavonoid pathway 75 8 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (33) View species results
Steroid pathway 33 12 CAS (8) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 753 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
POcom1650025130 Alkaloid IO medium borderline
POcom2290050090 Alkaloid IO medium borderline
POcom2340053520 Alkaloid IO medium borderline
POcom2600079300 Alkaloid IO medium borderline
POcom2670091400 Alkaloid IO medium borderline
POcom470980097130 Alkaloid IO low borderline
POcom473990097460 Alkaloid IO medium borderline
POcom651180108270 Alkaloid IO medium borderline
POcom680113800 Alkaloid IO medium borderline
POcom680113810 Alkaloid IO medium borderline
POcom700117420 Alkaloid IO medium borderline
POcom710121060 Alkaloid IO low borderline
POcom814040165120 Alkaloid IO medium borderline
POcom814580173010 Alkaloid IO medium borderline
POcom815010177440 Alkaloid IO medium borderline
POcom815500183730 Alkaloid IO medium borderline
POcom815590185720 Alkaloid IO medium borderline
POcom815810191050 Alkaloid IO medium borderline
POcom817000205750 Alkaloid IO medium borderline
POcom817570219630 Alkaloid IO medium borderline
POcom817690223000 Alkaloid IO medium borderline
POcom1910034550 Alkaloid ISY medium pass
POcom1910034570 Alkaloid ISY medium pass
POcom2430062410 Alkaloid LAMT low borderline
POcom810144010 Alkaloid LAMT medium borderline
POcom2380058740 Alkaloid MPO medium pass
POcom489870099420 Alkaloid MPO medium pass
POcom813720161660 Alkaloid MPO medium pass
POcom813900163180 Alkaloid MPO high pass
POcom814440171170 Alkaloid MPO medium pass
POcom815500184150 Alkaloid MPO high pass
POcom710121250 Alkaloid NCS medium borderline
POcom815560185540 Alkaloid NCS medium pass
POcom817240209120 Alkaloid NCS low borderline
POcom817240209740 Alkaloid NCS medium borderline
POcom818040234470 Alkaloid NCS medium borderline
POcom910248850 Alkaloid NCS low borderline
POcom910660249050 Alkaloid NCS medium borderline
POcom910670249060 Alkaloid NCS medium borderline
POcom1020005270 Alkaloid NMT medium pass
POcom1020005280 Alkaloid NMT medium pass
POcom1020006420 Alkaloid NMT low borderline
POcom1020006440 Alkaloid NMT low borderline
POcom1030007210 Alkaloid NMT low borderline
POcom1050010700 Alkaloid NMT medium pass
POcom1050012600 Alkaloid NMT medium borderline
POcom1480021430 Alkaloid NMT medium pass
POcom1870032600 Alkaloid NMT low borderline
POcom1870032730 Alkaloid NMT low borderline
POcom1870032740 Alkaloid NMT low borderline