Ptychomnion cygnisetum (ptychomnion_cygnisetum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.17% Terpenoid pathway 23.66% Alkaloid pathway 21.64% Flavonoid pathway 13.26% Rosmarinic acid pathway 8.72% Steroid pathway 6.54%

Family Distribution

596 Candidate Genes

C4H 7.55% C3'H/CYP98A 6.02% BAHD 5.59% POD 5.22% 4CL 4.6% CYP76 4.3% NMT 3.74% GS 3.19%

Other Families 59.79%

More Families (96)

IFS 49 3.01% T3O 46 2.82% F3'H/CYP75B 42 2.58% BR6OX2/CYP85A2 38 2.33% DWF4/CYP90B1 37 2.27% IFR 34 2.09% STR 33 2.03% F3H 31 1.9% UGT 29 1.78% UFGT 28 1.72% 7DLGT 27 1.66% PYKS 27 1.66% CAD 26 1.6% PAL 24 1.47% TRI/TRII 23 1.41% CODM/T6ODM 23 1.41% SMT1/SMT2/SMT3 23 1.41% IO 22 1.35% CHS 22 1.35% COMT 15 0.92% CYP71 15 0.92% 7DLH 14 0.86% CSE 13 0.8% CAS 12 0.74% CYP90D1 12 0.74% HCT 11 0.68% LAC 11 0.68% NCS 10 0.61% H6H 10 0.61% G8O/G8H 9 0.55% SGD 9 0.55% SLS 9 0.55% 16OMT 9 0.55% CNMT 9 0.55% F3'5'H/CYP75A 9 0.55% 8HGO 8 0.49% RAS 8 0.49% CPD/CYP90A1 8 0.49% T16H 7 0.43% BBE 7 0.43% PMT 7 0.43% ANR 7 0.43% FNS 7 0.43% CPR 7 0.43% DFR 6 0.37% CYP51G1 6 0.37% COR 5 0.31% LAMT 5 0.31% F5H/CYP84A 5 0.31% TDC 4 0.25% CYP719 4 0.25% MPO 4 0.25% CYP80F1 4 0.25% CHI 4 0.25% CCR 4 0.25% TAT 4 0.25% BR6OX1/CYP85A1 4 0.25% DET2 4 0.25% SQS/FDFT1 4 0.25% SMO1/SMO2 4 0.25% SQE 4 0.25% DWF5 4 0.25% GGPPS 4 0.25% TYDC_DDC 3 0.18% GES 3 0.18% ANS/LDOX 3 0.18% CCoAOMT 3 0.18% HYD1 3 0.18% DWF1 3 0.18% ROT3/CYP90C1 3 0.18% AACT 3 0.18% MVK 3 0.18% 6OMT_4OMT_SOMT 2 0.12% CYP80B1 2 0.12% ODC 2 0.12% ADC 2 0.12% HPPR 2 0.12% HDR/IspH 2 0.12% HMGR 2 0.12% MCT/IspD 2 0.12% CMK/IspE 2 0.12% FPPS 2 0.12% TPS 2 0.12% MVD 2 0.12% DXR 2 0.12% ISY 1 0.06% FLS 1 0.06% CPI1 1 0.06% FK 1 0.06% DWF7 1 0.06% MDS/IspF 1 0.06% PMK 1 0.06% HDS/IspG 1 0.06% HMGS 1 0.06% DXS 1 0.06% IDI 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	156	11	POD (81)	View species results
Terpenoid pathway	141	19	BAHD (61)	View species results
Alkaloid pathway	129	18	NMT (25)	View species results
Flavonoid pathway	79	10	UFGT (25)	View species results
Rosmarinic acid pathway	52	7	C4H (23)	View species results
Steroid pathway	39	13	CAS (11)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	636	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	110	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAD

Gene	Pathway	Family	Confidence	Status	Best Target
Pcyg1866600006460	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pcyg1905400016010	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pcyg2453260063970	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pcyg2615840083460	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
Pcyg2646610085320	Phenylpropanoid	CAD	low	borderline	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pcyg2655630088610	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pcyg2660260091300	Phenylpropanoid	CAD	medium	pass	CAD__00007__sp_O24562_CADH_MAIZE
Pcyg2660260091310	Phenylpropanoid	CAD	medium	pass	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pcyg2698240101810	Phenylpropanoid	CAD	low	borderline	CAD__00008__sp_O49482_CADH5_ARATH
Pcyg2709500103920	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
Pcyg2725120109710	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
Pcyg2789830136210	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pcyg2833590146800	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pcyg2833590146810	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pcyg2835520148400	Phenylpropanoid	CAD	medium	pass	CAD__00007__sp_O24562_CADH_MAIZE
Pcyg2846250156890	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Pcyg2876210179470	Phenylpropanoid	CAD	medium	pass	CAD__00013__sp_Q0JA75_CADH7_ORYSJ
Pcyg2880990181010	Phenylpropanoid	CAD	medium	pass	CAD__00011__sp_Q02971_CADH7_ARATH
Pcyg2897200189890	Phenylpropanoid	CAD	low	borderline	CAD__00012__sp_Q02972_CADH8_ARATH
Pcyg2903250193130	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pcyg2921630206790	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
Pcyg2922610207600	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Pcyg2927090210830	Phenylpropanoid	CAD	low	borderline	CAD__00007__sp_O24562_CADH_MAIZE
Pcyg2927870211510	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Pcyg2949680224080	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Pcyg2958280227160	Phenylpropanoid	CAD	low	borderline	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE