PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Pcyg1805890000840 Flavonoid F3H medium borderline
Pcyg1837810003920 Flavonoid F3H medium borderline
Pcyg1864910005930 Flavonoid F3H medium pass
Pcyg1894810011170 Flavonoid F3H medium borderline
Pcyg1909930016990 Flavonoid F3H low borderline
Pcyg2180130036650 Flavonoid F3H medium borderline
Pcyg2198530038470 Flavonoid F3H medium borderline
Pcyg2198770038580 Flavonoid F3H low borderline
Pcyg2453020063380 Flavonoid F3H medium borderline
Pcyg2511190072570 Flavonoid F3H medium borderline
Pcyg2511220072790 Flavonoid F3H medium borderline
Pcyg2511530074760 Flavonoid F3H medium borderline
Pcyg2511530074770 Flavonoid F3H medium borderline
Pcyg2650860086190 Flavonoid F3H low borderline
Pcyg2664980096030 Flavonoid F3H medium borderline
Pcyg2767650112980 Flavonoid F3H medium borderline
Pcyg2769030115950 Flavonoid F3H medium borderline
Pcyg2769570116890 Flavonoid F3H medium borderline
Pcyg2788350130940 Flavonoid F3H low borderline
Pcyg2788540131650 Flavonoid F3H medium borderline
Pcyg2788540131760 Flavonoid F3H medium borderline
Pcyg2788540131770 Flavonoid F3H medium pass
Pcyg2790460137900 Flavonoid F3H low borderline
Pcyg2863450165940 Flavonoid F3H low borderline
Pcyg2863740167530 Flavonoid F3H medium pass
Pcyg2871360173870 Flavonoid F3H medium pass
Pcyg2904180195020 Flavonoid F3H medium pass
Pcyg2907760198300 Flavonoid F3H low borderline
Pcyg2908840200380 Flavonoid F3H medium borderline
Pcyg2917540203110 Flavonoid F3H medium borderline
Pcyg2919870205730 Flavonoid F3H medium borderline