PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pcyg1836080003370 Rosmarinic Acid 4CL medium pass
Pcyg1841400004170 Rosmarinic Acid 4CL low borderline
Pcyg1866040006370 Rosmarinic Acid 4CL low borderline
Pcyg2118720024590 Rosmarinic Acid 4CL low borderline
Pcyg2118720024600 Rosmarinic Acid 4CL medium pass
Pcyg2163470028730 Rosmarinic Acid 4CL low borderline
Pcyg2375040048890 Rosmarinic Acid 4CL low borderline
Pcyg2383500053010 Rosmarinic Acid 4CL low borderline
Pcyg2509900069190 Rosmarinic Acid 4CL medium pass
Pcyg2513520077020 Rosmarinic Acid 4CL low borderline
Pcyg2664600095450 Rosmarinic Acid 4CL medium pass
Pcyg2717560107940 Rosmarinic Acid 4CL low borderline
Pcyg2742370109850 Rosmarinic Acid 4CL medium pass
Pcyg2766380111430 Rosmarinic Acid 4CL low borderline
Pcyg2766670111730 Rosmarinic Acid 4CL medium pass
Pcyg2767960114100 Rosmarinic Acid 4CL low borderline
Pcyg2780450127670 Rosmarinic Acid 4CL medium pass
Pcyg2789730135650 Rosmarinic Acid 4CL low borderline
Pcyg2833940146960 Rosmarinic Acid 4CL medium pass
Pcyg2841910154600 Rosmarinic Acid 4CL low borderline
Pcyg2895880189060 Rosmarinic Acid 4CL medium pass
Pcyg2906030197660 Rosmarinic Acid 4CL medium pass
Pcyg2929280212900 Rosmarinic Acid 4CL low borderline
Pcyg2936220216010 Rosmarinic Acid 4CL medium pass
Pcyg2973180230990 Rosmarinic Acid 4CL low borderline
Pcyg1776010000780 Rosmarinic Acid C4H medium pass
Pcyg1806520000970 Rosmarinic Acid C4H low borderline
Pcyg1834390002790 Rosmarinic Acid C4H medium pass
Pcyg1835400003120 Rosmarinic Acid C4H medium pass
Pcyg1892930008420 Rosmarinic Acid C4H low borderline
Pcyg1893420009270 Rosmarinic Acid C4H low borderline
Pcyg1893620009820 Rosmarinic Acid C4H low borderline
Pcyg1898560013370 Rosmarinic Acid C4H medium pass
Pcyg1905780016160 Rosmarinic Acid C4H low borderline
Pcyg1921900019250 Rosmarinic Acid C4H low borderline
Pcyg1924300019550 Rosmarinic Acid C4H low borderline
Pcyg1931770020790 Rosmarinic Acid C4H low borderline
Pcyg1943980021870 Rosmarinic Acid C4H medium pass
Pcyg2158080026240 Rosmarinic Acid C4H low borderline
Pcyg2163360028470 Rosmarinic Acid C4H medium pass
Pcyg2173430030120 Rosmarinic Acid C4H low borderline
Pcyg2173760031000 Rosmarinic Acid C4H low borderline
Pcyg2175670033270 Rosmarinic Acid C4H medium pass
Pcyg2178610035980 Rosmarinic Acid C4H low borderline
Pcyg2179600036360 Rosmarinic Acid C4H medium pass
Pcyg2192360037660 Rosmarinic Acid C4H low borderline
Pcyg2208120041640 Rosmarinic Acid C4H low borderline
Pcyg2382530052340 Rosmarinic Acid C4H low borderline
Pcyg2383000052800 Rosmarinic Acid C4H low borderline
Pcyg2385740054960 Rosmarinic Acid C4H low borderline