Ptychomnion cygnisetum (ptychomnion_cygnisetum)
Imported from atlas release summary for Ptychomnion cygnisetum.
596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
596
Candidate Genes
C4H
7.55%
C3'H/CYP98A
6.02%
BAHD
5.59%
POD
5.22%
4CL
4.6%
CYP76
4.3%
NMT
3.74%
GS
3.19%
Other Families
59.79%
More Families (96)
IFS
49
3.01%
T3O
46
2.82%
F3'H/CYP75B
42
2.58%
BR6OX2/CYP85A2
38
2.33%
DWF4/CYP90B1
37
2.27%
IFR
34
2.09%
STR
33
2.03%
F3H
31
1.9%
UGT
29
1.78%
UFGT
28
1.72%
7DLGT
27
1.66%
PYKS
27
1.66%
CAD
26
1.6%
PAL
24
1.47%
TRI/TRII
23
1.41%
CODM/T6ODM
23
1.41%
SMT1/SMT2/SMT3
23
1.41%
IO
22
1.35%
CHS
22
1.35%
COMT
15
0.92%
CYP71
15
0.92%
7DLH
14
0.86%
CSE
13
0.8%
CAS
12
0.74%
CYP90D1
12
0.74%
HCT
11
0.68%
LAC
11
0.68%
NCS
10
0.61%
H6H
10
0.61%
G8O/G8H
9
0.55%
SGD
9
0.55%
SLS
9
0.55%
16OMT
9
0.55%
CNMT
9
0.55%
F3'5'H/CYP75A
9
0.55%
8HGO
8
0.49%
RAS
8
0.49%
CPD/CYP90A1
8
0.49%
T16H
7
0.43%
BBE
7
0.43%
PMT
7
0.43%
ANR
7
0.43%
FNS
7
0.43%
CPR
7
0.43%
DFR
6
0.37%
CYP51G1
6
0.37%
COR
5
0.31%
LAMT
5
0.31%
F5H/CYP84A
5
0.31%
TDC
4
0.25%
CYP719
4
0.25%
MPO
4
0.25%
CYP80F1
4
0.25%
CHI
4
0.25%
CCR
4
0.25%
TAT
4
0.25%
BR6OX1/CYP85A1
4
0.25%
DET2
4
0.25%
SQS/FDFT1
4
0.25%
SMO1/SMO2
4
0.25%
SQE
4
0.25%
DWF5
4
0.25%
GGPPS
4
0.25%
TYDC_DDC
3
0.18%
GES
3
0.18%
ANS/LDOX
3
0.18%
CCoAOMT
3
0.18%
HYD1
3
0.18%
DWF1
3
0.18%
ROT3/CYP90C1
3
0.18%
AACT
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
CYP80B1
2
0.12%
ODC
2
0.12%
ADC
2
0.12%
HPPR
2
0.12%
HDR/IspH
2
0.12%
HMGR
2
0.12%
MCT/IspD
2
0.12%
CMK/IspE
2
0.12%
FPPS
2
0.12%
TPS
2
0.12%
MVD
2
0.12%
DXR
2
0.12%
ISY
1
0.06%
FLS
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
MDS/IspF
1
0.06%
PMK
1
0.06%
HDS/IspG
1
0.06%
HMGS
1
0.06%
DXS
1
0.06%
IDI
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 156 | 11 | POD (81) | View species results |
| Terpenoid pathway | 141 | 19 | BAHD (61) | View species results |
| Alkaloid pathway | 129 | 18 | NMT (25) | View species results |
| Flavonoid pathway | 79 | 10 | UFGT (25) | View species results |
| Rosmarinic acid pathway | 52 | 7 | C4H (23) | View species results |
| Steroid pathway | 39 | 13 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 636 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 110 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pcyg2904280195220 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Pcyg2917550203140 | Terpenoid | CYP76 | medium | pass | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Pcyg2918950204580 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Pcyg2918950204590 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Pcyg2921690206830 | Terpenoid | CYP76 | medium | borderline | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| Pcyg2921690206840 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Pcyg2922480207190 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pcyg2927090210880 | Terpenoid | CYP76 | medium | pass | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| Pcyg2927090210890 | Terpenoid | CYP76 | medium | borderline | CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ |
| Pcyg2927090210910 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Pcyg2929240212800 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pcyg2938250217430 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Pcyg2954210225130 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Pcyg2956230225680 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pcyg2963950229280 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Pcyg2973180230920 | Terpenoid | CYP76 | low | borderline | CYP76__00017__sp_Q14T82_C76B9_PETHY |
| Pcyg2976220231600 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Pcyg2984550232440 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Pcyg3073580233490 | Terpenoid | CYP76 | low | borderline | CYP76__00024__sp_W0FKI0_DOX1_PERHD |
| Pcyg380233780 | Terpenoid | CYP76 | low | borderline | CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT |