PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status
Pcyg1834610002850 Alkaloid NMT low borderline
Pcyg1861460005550 Alkaloid NMT low borderline
Pcyg1893320008850 Alkaloid NMT low borderline
Pcyg1894070010400 Alkaloid NMT medium pass
Pcyg1894250010720 Alkaloid NMT low borderline
Pcyg1896040012520 Alkaloid NMT medium pass
Pcyg1907980016360 Alkaloid NMT medium borderline
Pcyg1908120016530 Alkaloid NMT low borderline
Pcyg1973680023520 Alkaloid NMT medium borderline
Pcyg2143550025650 Alkaloid NMT low borderline
Pcyg2157920026030 Alkaloid NMT low borderline
Pcyg2251360046330 Alkaloid NMT low borderline
Pcyg2262450047110 Alkaloid NMT low borderline
Pcyg2381540050560 Alkaloid NMT medium borderline
Pcyg2382660052460 Alkaloid NMT medium borderline
Pcyg2384430053820 Alkaloid NMT medium borderline
Pcyg2385870055570 Alkaloid NMT medium pass
Pcyg2513670077430 Alkaloid NMT low borderline
Pcyg2516700078770 Alkaloid NMT medium borderline
Pcyg2523890080180 Alkaloid NMT medium pass
Pcyg2658420090710 Alkaloid NMT medium pass
Pcyg2664480094910 Alkaloid NMT medium pass
Pcyg2679600097010 Alkaloid NMT medium borderline
Pcyg2681520099280 Alkaloid NMT medium pass
Pcyg2681970099680 Alkaloid NMT low borderline
Pcyg2715620107050 Alkaloid NMT medium pass
Pcyg2715620107060 Alkaloid NMT medium pass
Pcyg2763940109990 Alkaloid NMT medium pass
Pcyg2767700113210 Alkaloid NMT low borderline
Pcyg2767900113970 Alkaloid NMT low borderline
Pcyg2767990114200 Alkaloid NMT medium borderline
Pcyg2768590115300 Alkaloid NMT medium pass
Pcyg2769120116180 Alkaloid NMT medium pass
Pcyg2769630117040 Alkaloid NMT low borderline
Pcyg2770050117540 Alkaloid NMT low borderline
Pcyg2779570126890 Alkaloid NMT medium pass
Pcyg2782260129590 Alkaloid NMT medium pass
Pcyg2789810136090 Alkaloid NMT low borderline
Pcyg2790480138150 Alkaloid NMT medium borderline
Pcyg2833730146870 Alkaloid NMT medium pass
Pcyg2838220150920 Alkaloid NMT medium borderline
Pcyg2838350151920 Alkaloid NMT medium pass
Pcyg2839820153630 Alkaloid NMT low borderline
Pcyg2846030156420 Alkaloid NMT medium pass
Pcyg2862240163230 Alkaloid NMT medium pass
Pcyg2867060171040 Alkaloid NMT medium pass
Pcyg2870810173210 Alkaloid NMT low borderline
Pcyg2871390174040 Alkaloid NMT low borderline
Pcyg2871960175540 Alkaloid NMT low borderline
Pcyg2890720184380 Alkaloid NMT medium pass