PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pcyg1836080003370 Flavonoid 4CL medium pass
Pcyg1841400004170 Flavonoid 4CL low borderline
Pcyg1866040006370 Flavonoid 4CL low borderline
Pcyg2118720024590 Flavonoid 4CL low borderline
Pcyg2118720024600 Flavonoid 4CL medium pass
Pcyg2163470028730 Flavonoid 4CL low borderline
Pcyg2375040048890 Flavonoid 4CL low borderline
Pcyg2383500053010 Flavonoid 4CL low borderline
Pcyg2509900069190 Flavonoid 4CL medium pass
Pcyg2513520077020 Flavonoid 4CL low borderline
Pcyg2664600095450 Flavonoid 4CL medium pass
Pcyg2717560107940 Flavonoid 4CL low borderline
Pcyg2742370109850 Flavonoid 4CL medium pass
Pcyg2766380111430 Flavonoid 4CL low borderline
Pcyg2766670111730 Flavonoid 4CL medium pass
Pcyg2767960114100 Flavonoid 4CL low borderline
Pcyg2780450127670 Flavonoid 4CL medium pass
Pcyg2789730135650 Flavonoid 4CL low borderline
Pcyg2833940146960 Flavonoid 4CL medium pass
Pcyg2841910154600 Flavonoid 4CL low borderline
Pcyg2895880189060 Flavonoid 4CL medium pass
Pcyg2906030197660 Flavonoid 4CL medium pass
Pcyg2929280212900 Flavonoid 4CL low borderline
Pcyg2936220216010 Flavonoid 4CL medium pass
Pcyg2973180230990 Flavonoid 4CL low borderline
Pcyg1905400016010 Flavonoid ANR medium borderline
Pcyg2383780053460 Flavonoid ANR medium borderline
Pcyg2664140094010 Flavonoid ANR low borderline
Pcyg2771670121670 Flavonoid ANR low borderline
Pcyg2846250156890 Flavonoid ANR medium borderline
Pcyg2902650191340 Flavonoid ANR medium borderline
Pcyg2947260222450 Flavonoid ANR low borderline
Pcyg2510060069580 Flavonoid ANS/LDOX medium borderline
Pcyg2681610099530 Flavonoid ANS/LDOX medium borderline
Pcyg2766290111180 Flavonoid ANS/LDOX medium borderline
Pcyg1806520000970 Flavonoid C4H low borderline
Pcyg1835400003120 Flavonoid C4H medium borderline
Pcyg2655630088580 Flavonoid C4H medium borderline
Pcyg2766280111120 Flavonoid C4H low borderline
Pcyg2846260157050 Flavonoid C4H medium pass
Pcyg2918950204590 Flavonoid C4H low borderline
Pcyg2919230205050 Flavonoid C4H low borderline
Pcyg2923220207840 Flavonoid C4H low borderline
Pcyg2927090210880 Flavonoid C4H low borderline
Pcyg2973180230920 Flavonoid C4H low borderline
Pcyg3073580233490 Flavonoid C4H medium pass
Pcyg380233780 Flavonoid C4H low borderline
Pcyg2386960058820 Flavonoid CHI medium pass
Pcyg2387170059420 Flavonoid CHI medium pass
Pcyg2717130107810 Flavonoid CHI medium pass