PlantSME Plant secondary metabolism enzyme database

Quercus variabilis (quercus_variabilis)

Imported from atlas release summary for Quercus variabilis.

1561
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 403 19 BAHD (135) View species results
Alkaloid pathway 364 19 7DLGT (64) View species results
Phenylpropanoid pathway 355 12 POD (147) View species results
Flavonoid pathway 190 14 UFGT (116) View species results
Rosmarinic acid pathway 127 7 C4H (64) View species results
Steroid pathway 122 10 CAS (72) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1524 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 205 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
quercus_variabilis_Quercus_variabilis00003138.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00003139.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00003176.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00003239.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00003683.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00007375.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00007378.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00007732.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00011771.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00011915.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00011916.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00011917.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00012827.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00012828.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00012829.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00012830.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00012967.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00013568.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014214.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014215.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014601.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014605.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014607.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014608.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014609.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014617.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014618.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014624.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014625.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014636.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014639.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014675.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014839.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00014843.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00015610.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00016366.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00016372.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00020132.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00022372.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00023060.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00023063.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00023071.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00023073.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00023075.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00025954.1 Alkaloid CODM/T6ODM low borderline
quercus_variabilis_Quercus_variabilis00025966.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00026685.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00026799.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00026801.1 Alkaloid CODM/T6ODM medium borderline
quercus_variabilis_Quercus_variabilis00026803.1 Alkaloid CODM/T6ODM medium borderline