PlantSME Plant secondary metabolism enzyme database

Quercus variabilis (quercus_variabilis)

Imported from atlas release summary for Quercus variabilis.

1561
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 403 19 BAHD (135) View species results
Alkaloid pathway 364 19 7DLGT (64) View species results
Phenylpropanoid pathway 355 12 POD (147) View species results
Flavonoid pathway 190 14 UFGT (116) View species results
Rosmarinic acid pathway 127 7 C4H (64) View species results
Steroid pathway 122 10 CAS (72) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1524 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 205 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SMT1/SMT2/SMT3
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Gene Pathway Family Confidence Status
quercus_variabilis_Quercus_variabilis00004161.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00007052.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00009737.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00009746.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00009760.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00009761.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00009763.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00010618.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00010741.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00011769.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00014093.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00014327.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00014328.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015643.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015646.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015649.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015680.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015685.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015689.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00015697.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00017628.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00017630.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00019013.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00019740.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00022321.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00022326.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00022330.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00022340.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00022417.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00022467.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00022753.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00022759.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00023302.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00023695.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00025031.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00029915.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00032448.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00036243.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00036317.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00037901.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00039418.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00042615.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00051599.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00052465.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00052466.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00052578.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00052607.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00053743.1 Steroid SMT1/SMT2/SMT3 medium pass
quercus_variabilis_Quercus_variabilis00056936.1 Steroid SMT1/SMT2/SMT3 low borderline
quercus_variabilis_Quercus_variabilis00057641.1 Steroid SMT1/SMT2/SMT3 medium pass