PlantSME Plant secondary metabolism enzyme database

Quercus variabilis (quercus_variabilis)

Imported from atlas release summary for Quercus variabilis.

1561
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 403 19 BAHD (135) View species results
Alkaloid pathway 364 19 7DLGT (64) View species results
Phenylpropanoid pathway 355 12 POD (147) View species results
Flavonoid pathway 190 14 UFGT (116) View species results
Rosmarinic acid pathway 127 7 C4H (64) View species results
Steroid pathway 122 10 CAS (72) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1524 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 205 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
Reset
Gene Pathway Family Confidence Status
quercus_variabilis_Quercus_variabilis00002457.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003469.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003473.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003480.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003482.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003489.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003492.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003641.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003653.1 Flavonoid F3'H/CYP75B medium pass
quercus_variabilis_Quercus_variabilis00003785.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00003786.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00007043.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00007139.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00009636.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00009680.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00009681.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00012237.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00016453.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00017673.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00018400.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00020666.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00021638.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00021875.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00022396.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00022977.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00023031.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00023451.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00024017.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00024565.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00025015.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00026946.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00028225.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00028226.1 Flavonoid F3'H/CYP75B medium pass
quercus_variabilis_Quercus_variabilis00028353.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00028361.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00028370.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00028378.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00029764.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00029770.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00030407.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030425.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030444.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030447.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00030449.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030450.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030451.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030454.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030455.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030466.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00030477.1 Flavonoid F3'H/CYP75B medium borderline