PlantSME Plant secondary metabolism enzyme database

Quercus variabilis (quercus_variabilis)

Imported from atlas release summary for Quercus variabilis.

1561
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 403 19 BAHD (135) View species results
Alkaloid pathway 364 19 7DLGT (64) View species results
Phenylpropanoid pathway 355 12 POD (147) View species results
Flavonoid pathway 190 14 UFGT (116) View species results
Rosmarinic acid pathway 127 7 C4H (64) View species results
Steroid pathway 122 10 CAS (72) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1524 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 205 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
quercus_variabilis_Quercus_variabilis00030480.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00031610.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00031686.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00032089.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00032866.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00035507.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00035517.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00036582.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00037776.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00039488.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00039569.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00041153.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00046097.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00048778.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00048796.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00048802.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00049064.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00049065.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00050012.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00050033.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00050034.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00050143.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00050203.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00050208.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00050210.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00052842.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00055078.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00056380.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00056843.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00057523.1 Flavonoid F3'H/CYP75B medium borderline
quercus_variabilis_Quercus_variabilis00057581.1 Flavonoid F3'H/CYP75B low borderline
quercus_variabilis_Quercus_variabilis00057611.1 Flavonoid F3'H/CYP75B medium borderline