PlantSME Plant secondary metabolism enzyme database

Ricciocarpus natans (ricciocarpus_natans)

Imported from atlas release summary for Ricciocarpus natans.

578
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 9 POD (119) View species results
Terpenoid pathway 129 19 BAHD (61) View species results
Alkaloid pathway 120 19 TRI/TRII (23) View species results
Flavonoid pathway 59 7 CHS (17) View species results
Rosmarinic acid pathway 54 7 C4H (23) View species results
Steroid pathway 33 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 521 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 123 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Rnatscaffold_80199570 Phenylpropanoid C3'H/CYP98A medium borderline
Rnatscaffold_80202590 Phenylpropanoid C3'H/CYP98A low borderline
Rnatscaffold_80206440 Phenylpropanoid C3'H/CYP98A medium borderline
Rnatscaffold_80210160 Phenylpropanoid C3'H/CYP98A low borderline
Rnatscaffold_80210180 Phenylpropanoid C3'H/CYP98A low borderline
Rnatscaffold_80210800 Phenylpropanoid C3'H/CYP98A medium borderline
Rnatscaffold_10018180 Phenylpropanoid C4H/CYP73A medium borderline
Rnatscaffold_30073250 Phenylpropanoid C4H/CYP73A medium borderline
Rnatscaffold_320085130 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_50123360 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_50125170 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_50131960 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_50136030 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_60163970 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_80211640 Phenylpropanoid C4H/CYP73A low borderline
Rnatscaffold_10001830 Phenylpropanoid CAD medium pass
Rnatscaffold_10012830 Phenylpropanoid CAD medium pass
Rnatscaffold_10016690 Phenylpropanoid CAD medium borderline
Rnatscaffold_30075700 Phenylpropanoid CAD medium borderline
Rnatscaffold_30075710 Phenylpropanoid CAD medium borderline
Rnatscaffold_40097930 Phenylpropanoid CAD medium pass
Rnatscaffold_40098870 Phenylpropanoid CAD medium pass
Rnatscaffold_40102210 Phenylpropanoid CAD medium borderline
Rnatscaffold_420113650 Phenylpropanoid CAD medium pass
Rnatscaffold_50122520 Phenylpropanoid CAD low borderline
Rnatscaffold_50124900 Phenylpropanoid CAD medium pass
Rnatscaffold_50134490 Phenylpropanoid CAD low borderline
Rnatscaffold_60150630 Phenylpropanoid CAD medium borderline
Rnatscaffold_60152070 Phenylpropanoid CAD medium borderline
Rnatscaffold_60152100 Phenylpropanoid CAD medium borderline
Rnatscaffold_60155600 Phenylpropanoid CAD medium borderline
Rnatscaffold_60162350 Phenylpropanoid CAD low borderline
Rnatscaffold_70170440 Phenylpropanoid CAD medium pass
Rnatscaffold_80198710 Phenylpropanoid CAD low borderline
Rnatscaffold_80210460 Phenylpropanoid CAD low borderline
Rnatscaffold_30062990 Phenylpropanoid CCR medium borderline
Rnatscaffold_60155590 Phenylpropanoid CCR medium borderline
Rnatscaffold_70166250 Phenylpropanoid CCR low borderline
Rnatscaffold_80196380 Phenylpropanoid CCR medium borderline
Rnatscaffold_20033030 Phenylpropanoid CCoAOMT medium pass
Rnatscaffold_20032600 Phenylpropanoid COMT low borderline
Rnatscaffold_260056070 Phenylpropanoid COMT low borderline
Rnatscaffold_30074960 Phenylpropanoid COMT low borderline
Rnatscaffold_30079780 Phenylpropanoid COMT low borderline
Rnatscaffold_440117130 Phenylpropanoid COMT low borderline
Rnatscaffold_70172120 Phenylpropanoid COMT low borderline
Rnatscaffold_80186910 Phenylpropanoid COMT low borderline
Rnatscaffold_80207950 Phenylpropanoid COMT low borderline
Rnatscaffold_80208220 Phenylpropanoid COMT low borderline
Rnatscaffold_220048920 Phenylpropanoid CSE medium pass