PlantSME Plant secondary metabolism enzyme database

Ricciocarpus natans (ricciocarpus_natans)

Imported from atlas release summary for Ricciocarpus natans.

578
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 9 POD (119) View species results
Terpenoid pathway 129 19 BAHD (61) View species results
Alkaloid pathway 120 19 TRI/TRII (23) View species results
Flavonoid pathway 59 7 CHS (17) View species results
Rosmarinic acid pathway 54 7 C4H (23) View species results
Steroid pathway 33 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 521 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 123 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Gene Pathway Family Confidence Status
Rnatscaffold_270057620 Phenylpropanoid CSE medium pass
Rnatscaffold_290059870 Phenylpropanoid CSE medium pass
Rnatscaffold_290059900 Phenylpropanoid CSE medium pass
Rnatscaffold_30066740 Phenylpropanoid CSE medium pass
Rnatscaffold_30081720 Phenylpropanoid CSE medium pass
Rnatscaffold_330086270 Phenylpropanoid CSE medium pass
Rnatscaffold_330086410 Phenylpropanoid CSE medium pass
Rnatscaffold_40097090 Phenylpropanoid CSE medium pass
Rnatscaffold_500138220 Phenylpropanoid CSE low borderline
Rnatscaffold_500138720 Phenylpropanoid CSE medium pass
Rnatscaffold_50120890 Phenylpropanoid CSE low borderline
Rnatscaffold_520141740 Phenylpropanoid CSE low borderline
Rnatscaffold_70170340 Phenylpropanoid CSE medium pass
Rnatscaffold_70171470 Phenylpropanoid CSE medium pass
Rnatscaffold_70173860 Phenylpropanoid CSE medium pass
Rnatscaffold_70174810 Phenylpropanoid CSE medium pass
Rnatscaffold_70174830 Phenylpropanoid CSE medium pass
Rnatscaffold_70174840 Phenylpropanoid CSE medium pass
Rnatscaffold_70180710 Phenylpropanoid CSE medium pass
Rnatscaffold_70182560 Phenylpropanoid CSE medium pass
Rnatscaffold_10000440 Phenylpropanoid F5H/CYP84A medium borderline
Rnatscaffold_10016510 Phenylpropanoid F5H/CYP84A medium borderline
Rnatscaffold_20032380 Phenylpropanoid F5H/CYP84A medium borderline
Rnatscaffold_20043740 Phenylpropanoid F5H/CYP84A medium borderline
Rnatscaffold_40098770 Phenylpropanoid F5H/CYP84A medium borderline
Rnatscaffold_10016120 Phenylpropanoid HCT medium pass
Rnatscaffold_20033750 Phenylpropanoid HCT low borderline
Rnatscaffold_20037970 Phenylpropanoid HCT medium pass
Rnatscaffold_30066720 Phenylpropanoid HCT medium pass
Rnatscaffold_50123160 Phenylpropanoid HCT medium pass
Rnatscaffold_50134540 Phenylpropanoid HCT low borderline
Rnatscaffold_50134550 Phenylpropanoid HCT low borderline
Rnatscaffold_70168830 Phenylpropanoid HCT low borderline
Rnatscaffold_70173260 Phenylpropanoid HCT low borderline
Rnatscaffold_70173290 Phenylpropanoid HCT low borderline
Rnatscaffold_70173300 Phenylpropanoid HCT low borderline
Rnatscaffold_70177520 Phenylpropanoid HCT low borderline
Rnatscaffold_70178630 Phenylpropanoid HCT medium pass
Rnatscaffold_80185320 Phenylpropanoid HCT medium pass
Rnatscaffold_80186050 Phenylpropanoid HCT low borderline
Rnatscaffold_80186070 Phenylpropanoid HCT medium pass
Rnatscaffold_80209330 Phenylpropanoid HCT medium pass
Rnatscaffold_80212860 Phenylpropanoid HCT medium pass
Rnatscaffold_20043910 Phenylpropanoid LAC medium pass
Rnatscaffold_40104840 Phenylpropanoid LAC medium pass
Rnatscaffold_40106710 Phenylpropanoid LAC medium pass
Rnatscaffold_70175420 Phenylpropanoid LAC medium pass
Rnatscaffold_70180940 Phenylpropanoid LAC medium pass
Rnatscaffold_70181060 Phenylpropanoid LAC medium pass
Rnatscaffold_70182770 Phenylpropanoid LAC medium pass