PlantSME Plant secondary metabolism enzyme database

Solanum lycopersicum (solanum_lycopersicum)

Imported from atlas release summary for Solanum lycopersicum.

1896
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 19 UGT (201) View species results
Alkaloid pathway 398 24 7DLGT (94) View species results
Phenylpropanoid pathway 382 12 POD (160) View species results
Flavonoid pathway 266 15 UFGT (174) View species results
Rosmarinic acid pathway 176 7 C4H (72) View species results
Steroid pathway 109 12 SMT1/SMT2/SMT3 (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1833 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Slyc04G0018720.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc04G0018730.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc04G0024870.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc04G0024890.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc04G0024920.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc05G0006360.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc05G0006390.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc05G0009900.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc05G0012820.1 Steroid BR6OX2/CYP85A2 medium borderline
Slyc05G0017900.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc05G0018030.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0006720.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0010470.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0016420.1 Steroid BR6OX2/CYP85A2 medium borderline
Slyc06G0017250.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0017260.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0017280.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0017980.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0023110.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0025760.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc06G0026390.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0001260.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0002640.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0010970.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0015510.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0015790.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0018950.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019060.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019080.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019090.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019100.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019110.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019120.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019130.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0019150.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0020630.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0021180.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc07G0021190.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0000760.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0007460.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0014080.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0015620.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0016650.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021020.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021040.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021050.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021060.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021070.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021080.1 Steroid BR6OX2/CYP85A2 low borderline
Slyc08G0021090.1 Steroid BR6OX2/CYP85A2 low borderline