PlantSME Plant secondary metabolism enzyme database

Sparganium stoloniferum (sparganium_stoloniferum)

Imported from atlas release summary for Sparganium stoloniferum.

980
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 271 19 BAHD (133) View species results
Phenylpropanoid pathway 251 11 POD (130) View species results
Alkaloid pathway 198 20 NMT (29) View species results
Flavonoid pathway 113 9 UFGT (62) View species results
Rosmarinic acid pathway 90 7 C4H (32) View species results
Steroid pathway 57 12 SMT1/SMT2/SMT3 (21) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 870 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 251 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
sparganium_stoloniferum_evm.model.Chr1.2512 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr1.2515 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr1.3312 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr1.3682 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr1.864 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr10.1270 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr10.1402 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr11.1066 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr11.1067 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr11.1201 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr11.1254 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr12.1263 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr12.243 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr13.1185 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr13.538 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr14.968 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr3.1156 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.1961 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr3.2009 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.2798 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.467 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.617 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.990 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.993 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr3.998 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr3.999 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr4.1816 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr4.477 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr5.238 Phenylpropanoid CAD medium pass
sparganium_stoloniferum_evm.model.Chr7.133 Phenylpropanoid CAD low borderline
sparganium_stoloniferum_evm.model.Chr7.1533 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr7.1534 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr7.1784 Phenylpropanoid CAD medium borderline
sparganium_stoloniferum_evm.model.Chr8.1412 Phenylpropanoid CAD medium pass