PlantSME Plant secondary metabolism enzyme database

Sparganium stoloniferum (sparganium_stoloniferum)

Imported from atlas release summary for Sparganium stoloniferum.

980
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 271 19 BAHD (133) View species results
Phenylpropanoid pathway 251 11 POD (130) View species results
Alkaloid pathway 198 20 NMT (29) View species results
Flavonoid pathway 113 9 UFGT (62) View species results
Rosmarinic acid pathway 90 7 C4H (32) View species results
Steroid pathway 57 12 SMT1/SMT2/SMT3 (21) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 870 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 251 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
sparganium_stoloniferum_evm.model.Chr1.2542 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr1.2862 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr1.2864 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr1.3640 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr10.1614 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr10.482 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr11.1769 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr11.510 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr11.733 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr13.1554 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr13.915 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr15.1266 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr15.1268 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr2.2333 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr2.339 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr4.1429 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr4.2285 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr4.919 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr4.98 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr5.1212 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr5.1216 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr5.1222 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr6.1313 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr6.285 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr6.40 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr7.1846 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
sparganium_stoloniferum_evm.model.Chr8.1361 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
sparganium_stoloniferum_evm.model.Chr9.264 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL