PlantSME Plant secondary metabolism enzyme database

Sparganium stoloniferum (sparganium_stoloniferum)

Imported from atlas release summary for Sparganium stoloniferum.

980
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 271 19 BAHD (133) View species results
Phenylpropanoid pathway 251 11 POD (130) View species results
Alkaloid pathway 198 20 NMT (29) View species results
Flavonoid pathway 113 9 UFGT (62) View species results
Rosmarinic acid pathway 90 7 C4H (32) View species results
Steroid pathway 57 12 SMT1/SMT2/SMT3 (21) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 870 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 251 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
sparganium_stoloniferum_evm.model.Chr1.3169 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr10.1125 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr10.1310 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr14.810 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr14.820 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr14.862 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr15.1093 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr2.1658 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr2.2109 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr2.2835 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr2.566 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr3.2569 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr3.2842 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr3.314 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr4.1051 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr4.1434 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr4.1435 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr4.1765 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr4.2016 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr4.2017 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr4.2183 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr5.1825 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr5.2035 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr6.1451 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr6.1452 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr7.1683 Phenylpropanoid LAC low borderline
sparganium_stoloniferum_evm.model.Chr7.1766 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr7.1957 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr7.1958 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr7.1975 Phenylpropanoid LAC medium pass
sparganium_stoloniferum_evm.model.Chr7.607 Phenylpropanoid LAC medium pass