Sparganium stoloniferum (sparganium_stoloniferum)
Imported from atlas release summary for Sparganium stoloniferum.
980
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
980
Candidate Genes
BAHD
7.18%
C3'H/CYP98A
6.05%
POD
5.97%
C4H
5.84%
4CL
4.38%
T3O
3.8%
IFS
3.46%
CYP76
3.38%
Other Families
59.95%
More Families (96)
UGT
73
3.05%
UFGT
68
2.84%
7DLGT
66
2.75%
DWF4/CYP90B1
58
2.42%
F3H
54
2.25%
NMT
53
2.21%
F3'H/CYP75B
46
1.92%
HCT
42
1.75%
BR6OX2/CYP85A2
41
1.71%
STR
37
1.54%
RAS
37
1.54%
PMT
36
1.5%
SMT1/SMT2/SMT3
36
1.5%
CYP71
35
1.46%
CAD
34
1.42%
LAC
31
1.29%
PYKS
29
1.21%
CODM/T6ODM
28
1.17%
CSE
28
1.17%
H6H
25
1.04%
IFR
25
1.04%
T16H
24
1.0%
CYP90D1
23
0.96%
GS
21
0.88%
FNS
20
0.83%
TRI/TRII
19
0.79%
CAS
19
0.79%
ANR
17
0.71%
CCR
16
0.67%
G8O/G8H
15
0.63%
PAL
15
0.63%
COR
14
0.58%
NCS
14
0.58%
SGD
14
0.58%
LAMT
12
0.5%
GES
12
0.5%
F3'5'H/CYP75A
12
0.5%
TPS
12
0.5%
SLS
11
0.46%
8HGO
11
0.46%
CPD/CYP90A1
10
0.42%
BR6OX1/CYP85A1
10
0.42%
IO
9
0.38%
DFR
9
0.38%
COMT
9
0.38%
CYP51G1
9
0.38%
TAT
8
0.33%
ROT3/CYP90C1
8
0.33%
MVK
8
0.33%
BBE
7
0.29%
CNMT
7
0.29%
CCoAOMT
7
0.29%
16OMT
6
0.25%
TDC
6
0.25%
MPO
6
0.25%
TYDC_DDC
6
0.25%
7DLH
6
0.25%
ANS/LDOX
6
0.25%
CHI
6
0.25%
DET2
6
0.25%
AACT
6
0.25%
CHS
5
0.21%
CPR
5
0.21%
HPPR
5
0.21%
SMO1/SMO2
5
0.21%
SQS/FDFT1
5
0.21%
GGPPS
5
0.21%
CYP719
4
0.17%
CYP80B1
4
0.17%
F5H/CYP84A
4
0.17%
FPPS
4
0.17%
XMT_MXMT_DXMT
3
0.13%
ADC
3
0.13%
DWF7
3
0.13%
HYD1
3
0.13%
HMGR
3
0.13%
PMK
3
0.13%
IDI
3
0.13%
MVD
3
0.13%
HMGS
3
0.13%
DXS
3
0.13%
6OMT_4OMT_SOMT
2
0.08%
ISY
2
0.08%
FLS
2
0.08%
DWF1
2
0.08%
DWF5
2
0.08%
HDS/IspG
2
0.08%
CMK/IspE
2
0.08%
MCT/IspD
2
0.08%
CYP80F1
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
SQE
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 271 | 19 | BAHD (133) | View species results |
| Phenylpropanoid pathway | 251 | 11 | POD (130) | View species results |
| Alkaloid pathway | 198 | 20 | NMT (29) | View species results |
| Flavonoid pathway | 113 | 9 | UFGT (62) | View species results |
| Rosmarinic acid pathway | 90 | 7 | C4H (32) | View species results |
| Steroid pathway | 57 | 12 | SMT1/SMT2/SMT3 (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 870 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 251 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| sparganium_stoloniferum_evm.model.Chr1.1273 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| sparganium_stoloniferum_evm.model.Chr1.2290 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr1.2468 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| sparganium_stoloniferum_evm.model.Chr1.3328 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| sparganium_stoloniferum_evm.model.Chr1.3368 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| sparganium_stoloniferum_evm.model.Chr1.79 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| sparganium_stoloniferum_evm.model.Chr10.1075 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| sparganium_stoloniferum_evm.model.Chr10.1281 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| sparganium_stoloniferum_evm.model.Chr10.160 | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr10.1663 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| sparganium_stoloniferum_evm.model.Chr10.29 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr10.989 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| sparganium_stoloniferum_evm.model.Chr11.1068 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| sparganium_stoloniferum_evm.model.Chr11.1122 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr11.1124 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| sparganium_stoloniferum_evm.model.Chr11.1395 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| sparganium_stoloniferum_evm.model.Chr11.1428 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| sparganium_stoloniferum_evm.model.Chr11.1885 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr11.1886 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr11.1887 | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr11.263 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr11.901 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| sparganium_stoloniferum_evm.model.Chr12.1171 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| sparganium_stoloniferum_evm.model.Chr12.1220 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| sparganium_stoloniferum_evm.model.Chr12.697 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| sparganium_stoloniferum_evm.model.Chr12.698 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr12.949 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr12.967 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr13.1238 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| sparganium_stoloniferum_evm.model.Chr13.1442 | Phenylpropanoid | POD | low | borderline | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| sparganium_stoloniferum_evm.model.Chr13.1443 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| sparganium_stoloniferum_evm.model.Chr13.412 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr13.47 | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr13.556 | Phenylpropanoid | POD | low | borderline | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| sparganium_stoloniferum_evm.model.Chr13.560 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr13.596 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr13.79 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| sparganium_stoloniferum_evm.model.Chr14.1370 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| sparganium_stoloniferum_evm.model.Chr14.471 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| sparganium_stoloniferum_evm.model.Chr14.524 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| sparganium_stoloniferum_evm.model.Chr14.924 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| sparganium_stoloniferum_evm.model.Chr15.1052 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| sparganium_stoloniferum_evm.model.Chr15.1145 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| sparganium_stoloniferum_evm.model.Chr15.793 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr15.801 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr15.803 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr15.821 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| sparganium_stoloniferum_evm.model.Chr15.914 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| sparganium_stoloniferum_evm.model.Chr2.1594 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| sparganium_stoloniferum_evm.model.Chr2.2244 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |