Sparganium stoloniferum (sparganium_stoloniferum)
Imported from atlas release summary for Sparganium stoloniferum.
1216
Candidate Protein Records
980
Pathway-Level Records
2397
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2397
Family-Level Calls
BAHD
7.18%
C3'H/CYP98A
6.05%
POD
5.97%
C4H
5.84%
4CL
4.38%
T3O
3.8%
IFS
3.46%
CYP76
3.38%
Other Families
59.95%
More Families (96)
UGT
73
3.05%
UFGT
68
2.84%
7DLGT
66
2.75%
DWF4/CYP90B1
58
2.42%
F3H
54
2.25%
NMT
53
2.21%
F3'H/CYP75B
46
1.92%
HCT
42
1.75%
BR6OX2/CYP85A2
41
1.71%
STR
37
1.54%
RAS
37
1.54%
PMT
36
1.5%
SMT1/SMT2/SMT3
36
1.5%
CYP71
35
1.46%
CAD
34
1.42%
LAC
31
1.29%
PYKS
29
1.21%
CODM/T6ODM
28
1.17%
CSE
28
1.17%
H6H
25
1.04%
IFR
25
1.04%
T16H
24
1.0%
CYP90D1
23
0.96%
GS
21
0.88%
FNS
20
0.83%
TRI/TRII
19
0.79%
CAS
19
0.79%
ANR
17
0.71%
CCR
16
0.67%
G8O/G8H
15
0.63%
PAL
15
0.63%
COR
14
0.58%
NCS
14
0.58%
SGD
14
0.58%
LAMT
12
0.5%
GES
12
0.5%
F3'5'H/CYP75A
12
0.5%
TPS
12
0.5%
SLS
11
0.46%
8HGO
11
0.46%
CPD/CYP90A1
10
0.42%
BR6OX1/CYP85A1
10
0.42%
IO
9
0.38%
DFR
9
0.38%
COMT
9
0.38%
CYP51G1
9
0.38%
TAT
8
0.33%
ROT3/CYP90C1
8
0.33%
MVK
8
0.33%
BBE
7
0.29%
CNMT
7
0.29%
CCoAOMT
7
0.29%
16OMT
6
0.25%
TDC
6
0.25%
MPO
6
0.25%
TYDC_DDC
6
0.25%
7DLH
6
0.25%
ANS/LDOX
6
0.25%
CHI
6
0.25%
DET2
6
0.25%
AACT
6
0.25%
CHS
5
0.21%
CPR
5
0.21%
HPPR
5
0.21%
SMO1/SMO2
5
0.21%
SQS/FDFT1
5
0.21%
GGPPS
5
0.21%
CYP719
4
0.17%
CYP80B1
4
0.17%
F5H/CYP84A
4
0.17%
FPPS
4
0.17%
XMT_MXMT_DXMT
3
0.13%
ADC
3
0.13%
DWF7
3
0.13%
HYD1
3
0.13%
HMGR
3
0.13%
PMK
3
0.13%
IDI
3
0.13%
MVD
3
0.13%
HMGS
3
0.13%
DXS
3
0.13%
6OMT_4OMT_SOMT
2
0.08%
ISY
2
0.08%
FLS
2
0.08%
DWF1
2
0.08%
DWF5
2
0.08%
HDS/IspG
2
0.08%
CMK/IspE
2
0.08%
MCT/IspD
2
0.08%
CYP80F1
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
SQE
1
0.04%
HDR/IspH
1
0.04%
DXR
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 271 | 19 | BAHD (133) | View species results |
| Phenylpropanoid pathway | 251 | 11 | POD (130) | View species results |
| Alkaloid pathway | 198 | 20 | NMT (29) | View species results |
| Flavonoid pathway | 113 | 9 | UFGT (62) | View species results |
| Rosmarinic acid pathway | 90 | 7 | C4H (32) | View species results |
| Steroid pathway | 57 | 12 | SMT1/SMT2/SMT3 (21) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 870 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 251 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| sparganium_stoloniferum_evm.model.Chr4.381 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr4.383 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr4.386 | Alkaloid | PMT | low | borderline |
| sparganium_stoloniferum_evm.model.Chr5.1497 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr5.1498_evm.model.Chr5.1499 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr6.1680 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr6.1997 | Alkaloid | PMT | low | borderline |
| sparganium_stoloniferum_evm.model.Chr6.64 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr6.65 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr7.1156 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr7.1158 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr7.1164 | Alkaloid | PMT | medium | pass |
| sparganium_stoloniferum_evm.model.Chr9.730 | Alkaloid | PMT | low | borderline |
| sparganium_stoloniferum_evm.model.Chr9.734 | Alkaloid | PMT | low | borderline |
| sparganium_stoloniferum_evm.model.Chr1.2320 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr1.3283 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr1.3289 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr1.373 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr1.90 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr11.43 | Alkaloid | PYKS | high | pass |
| sparganium_stoloniferum_evm.model.Chr12.1252 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr12.1541 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr12.32 | Alkaloid | PYKS | high | pass |
| sparganium_stoloniferum_evm.model.Chr12.34 | Alkaloid | PYKS | high | pass |
| sparganium_stoloniferum_evm.model.Chr2.1480 | Alkaloid | PYKS | high | pass |
| sparganium_stoloniferum_evm.model.Chr2.1555 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.155 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.2320 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.2328 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.2530 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.2738 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.336 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr3.906 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr4.2198 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr4.2262 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr4.2507 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr4.561 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr4.671 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr7.427 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr8.716 | Alkaloid | PYKS | high | pass |
| sparganium_stoloniferum_evm.model.Chr8.799 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr9.1187 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr9.1323 | Alkaloid | PYKS | low | borderline |
| sparganium_stoloniferum_evm.model.Chr1.540 | Alkaloid | SGD | medium | pass |
| sparganium_stoloniferum_evm.model.Chr11.1549 | Alkaloid | SGD | medium | pass |
| sparganium_stoloniferum_evm.model.Chr11.1764 | Alkaloid | SGD | medium | pass |
| sparganium_stoloniferum_evm.model.Chr11.908.1 | Alkaloid | SGD | medium | pass |
| sparganium_stoloniferum_evm.model.Chr14.1382 | Alkaloid | SGD | medium | pass |
| sparganium_stoloniferum_evm.model.Chr15.866 | Alkaloid | SGD | low | borderline |
| sparganium_stoloniferum_evm.model.Chr2.959 | Alkaloid | SGD | medium | pass |