PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.05% Phenylpropanoid pathway 22.32% Alkaloid pathway 19.38% Flavonoid pathway 13.76% Steroid pathway 6.29% Rosmarinic acid pathway 6.21%
Family Distribution
BAHD 7.5% POD 5.83% C4H 5.22% 4CL 4.75% UGT 4.27% C3'H/CYP98A 4.04% NMT 3.36% F3H 3.12%
Other Families 61.91%
More Families (98)
7DLGT 90 3.05% IFS 90 3.05% CYP76 86 2.92% UFGT 72 2.44% H6H 57 1.93% T3O 57 1.93% SMT1/SMT2/SMT3 57 1.93% IFR 54 1.83% F3'H/CYP75B 54 1.83% DWF4/CYP90B1 54 1.83% STR 50 1.7% CODM/T6ODM 49 1.66% CAD 41 1.39% CYP71 41 1.39% CAS 34 1.15% G8O/G8H 32 1.09% BR6OX2/CYP85A2 32 1.09% GS 29 0.98% CYP90D1 29 0.98% PYKS 28 0.95% FNS 28 0.95% CCR 27 0.92% CSE 26 0.88% LAC 26 0.88% 7DLH 24 0.81% T16H 23 0.78% DFR 23 0.78% SGD 22 0.75% ANR 22 0.75% IO 21 0.71% NCS 20 0.68% CHS 20 0.68% HCT 20 0.68% SLS 18 0.61% ANS/LDOX 18 0.61% CPD/CYP90A1 18 0.61% F3'5'H/CYP75A 17 0.58% RAS 17 0.58% TRI/TRII 15 0.51% CNMT 15 0.51% 8HGO 15 0.51% TAT 15 0.51% CPR 15 0.51% COMT 14 0.47% TPS 14 0.47% AACT 13 0.44% GES 11 0.37% PMT 11 0.37% CYP719 11 0.37% F5H/CYP84A 11 0.37% BR6OX1/CYP85A1 11 0.37% ROT3/CYP90C1 11 0.37% COR 10 0.34% CYP80B1 10 0.34% ISY 10 0.34% CCoAOMT 10 0.34% GGPPS 9 0.31% MPO 8 0.27% SQE 8 0.27% SMO1/SMO2 8 0.27% FPPS 8 0.27% MVD 7 0.24% DXS 7 0.24% MVK 7 0.24% TYDC_DDC 6 0.2% 6OMT_4OMT_SOMT 6 0.2% CYP51G1 6 0.2% MCT/IspD 6 0.2% HMGR 6 0.2% 16OMT 5 0.17% XMT_MXMT_DXMT 5 0.17% HPPR 5 0.17% SQS/FDFT1 5 0.17% PMK 5 0.17% LAMT 4 0.14% CHI 4 0.14% DET2 4 0.14% DWF7 4 0.14% HMGS 4 0.14% CMK/IspE 4 0.14% TDC 3 0.1% ADC 3 0.1% PAL 3 0.1% HYD1 3 0.1% IDI 3 0.1% ODC 2 0.07% DWF5 2 0.07% DWF1 2 0.07% GPPS 2 0.07% HDS/IspG 2 0.07% MDS/IspF 2 0.07% DXR 2 0.07% HDR/IspH 2 0.07% CYP80F1 1 0.03% BBE 1 0.03% FLS 1 0.03% FK 1 0.03% CPI1 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
TOsin16G0009650 Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
TOsin16G0009660 Terpenoid BAHD medium pass BAHD__00042__sp_Q500Z2_ZDH20_ARATH
TOsin16G0010150 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
TOsin16G0010170 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
TOsin16G0014070 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
TOsin17G0004690 Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
TOsin17G0005330 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
TOsin17G0010020 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
TOsin17G0010330 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
TOsin18G0005080 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
TOsin18G0005220 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
TOsin18G0005430 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
TOsin18G0009980 Terpenoid BAHD low borderline BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
TOsin18G0009990 Terpenoid BAHD low borderline BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
TOsin18G0010000 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
TOsin18G0010750 Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
TOsin18G0014440 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
TOsin19G0006600 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
TOsin19G0007680 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
TOsin19G0008200 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
TOsin19G0012410 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
TOsin19G0012900 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
TOsin19G0012910 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
TOsin20G0004760 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
TOsin20G0005160 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
TOsin20G0005790 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
TOsin21G0000160 Terpenoid BAHD low borderline BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
TOsin21G0001680 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
TOsin21G0005100 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
TOsin21G0008330 Terpenoid BAHD low borderline BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
TOsin21G0009590 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
TOsin21G0009600 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
TOsin21G0009640 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
TOsin21G0009660 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
TOsin21G0009680 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
TOsin22G0007690 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
TOsin22G0009410 Terpenoid BAHD medium pass BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
TOsin23G0001170 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
TOsin23G0002440 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
TOsin23G0003180 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
TOsin23G0005660 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
TOsin23G0005750 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
TOsin23G0008260 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
TOsin23G0008800 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
TOsin23G0010200 Terpenoid BAHD medium pass BAHD__00086__sp_Q9M306_ZDH10_ARATH
TOsin23G0010280 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
TOsin23G0011100 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
TOsin23G0011160 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
TOsin23G0011900 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
TOsin23G0018770 Terpenoid BAHD low borderline BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH