PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1703
Candidate Protein Records
1192
Pathway-Level Records
2948
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 32.05% Phenylpropanoid pathway 22.32% Alkaloid pathway 19.38% Flavonoid pathway 13.76% Steroid pathway 6.29% Rosmarinic acid pathway 6.21%
Family Distribution
BAHD 7.5% POD 5.83% C4H 5.22% 4CL 4.75% UGT 4.27% C3'H/CYP98A 4.04% NMT 3.36% F3H 3.12%
Other Families 61.91%
More Families (98)
7DLGT 90 3.05% IFS 90 3.05% CYP76 86 2.92% UFGT 72 2.44% H6H 57 1.93% T3O 57 1.93% SMT1/SMT2/SMT3 57 1.93% IFR 54 1.83% F3'H/CYP75B 54 1.83% DWF4/CYP90B1 54 1.83% STR 50 1.7% CODM/T6ODM 49 1.66% CAD 41 1.39% CYP71 41 1.39% CAS 34 1.15% G8O/G8H 32 1.09% BR6OX2/CYP85A2 32 1.09% GS 29 0.98% CYP90D1 29 0.98% PYKS 28 0.95% FNS 28 0.95% CCR 27 0.92% CSE 26 0.88% LAC 26 0.88% 7DLH 24 0.81% T16H 23 0.78% DFR 23 0.78% SGD 22 0.75% ANR 22 0.75% IO 21 0.71% NCS 20 0.68% CHS 20 0.68% HCT 20 0.68% SLS 18 0.61% ANS/LDOX 18 0.61% CPD/CYP90A1 18 0.61% F3'5'H/CYP75A 17 0.58% RAS 17 0.58% TRI/TRII 15 0.51% CNMT 15 0.51% 8HGO 15 0.51% TAT 15 0.51% CPR 15 0.51% COMT 14 0.47% TPS 14 0.47% AACT 13 0.44% GES 11 0.37% PMT 11 0.37% CYP719 11 0.37% F5H/CYP84A 11 0.37% BR6OX1/CYP85A1 11 0.37% ROT3/CYP90C1 11 0.37% COR 10 0.34% CYP80B1 10 0.34% ISY 10 0.34% CCoAOMT 10 0.34% GGPPS 9 0.31% MPO 8 0.27% SQE 8 0.27% SMO1/SMO2 8 0.27% FPPS 8 0.27% MVD 7 0.24% DXS 7 0.24% MVK 7 0.24% TYDC_DDC 6 0.2% 6OMT_4OMT_SOMT 6 0.2% CYP51G1 6 0.2% MCT/IspD 6 0.2% HMGR 6 0.2% 16OMT 5 0.17% XMT_MXMT_DXMT 5 0.17% HPPR 5 0.17% SQS/FDFT1 5 0.17% PMK 5 0.17% LAMT 4 0.14% CHI 4 0.14% DET2 4 0.14% DWF7 4 0.14% HMGS 4 0.14% CMK/IspE 4 0.14% TDC 3 0.1% ADC 3 0.1% PAL 3 0.1% HYD1 3 0.1% IDI 3 0.1% ODC 2 0.07% DWF5 2 0.07% DWF1 2 0.07% GPPS 2 0.07% HDS/IspG 2 0.07% MDS/IspF 2 0.07% DXR 2 0.07% HDR/IspH 2 0.07% CYP80F1 1 0.03% BBE 1 0.03% FLS 1 0.03% FK 1 0.03% CPI1 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
TOsin25G0012570 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
TOsin26G0000850 Phenylpropanoid POD low borderline POD__00013__sp_Q4W1I8_PER1_ZINEL
TOsin26G0001010 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
TOsin26G0001770 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
TOsin26G0002030 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
TOsin26G0002220 Phenylpropanoid POD medium pass POD__00018__sp_Q8H0V5_OCP3_ARATH
TOsin26G0004990 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
TOsin26G0005830 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
TOsin26G0008090 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
TOsin26G0010600 Phenylpropanoid POD low borderline POD__00010__sp_P84516_PER1_SORBI
TOsin27G0003640 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
TOsin27G0004190 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
TOsin27G0005660 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TOsin27G0008270 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
TOsin28G0001280 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
TOsin28G0003610 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TOsin28G0004900 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
TOsinHiC_scaffold_1030000340 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
TOsinHiC_scaffold_1030000460 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
TOsinHiC_scaffold_1540003240 Phenylpropanoid POD medium pass POD__00020__sp_Q9FE01_APX2_ORYSJ
TOsinHiC_scaffold_2340004050 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
TOsinHiC_scaffold_960006390 Phenylpropanoid POD medium pass POD__00018__sp_Q8H0V5_OCP3_ARATH