PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
TOsin15G0010330 Alkaloid 7DLGT medium pass
TOsin15G0010340 Alkaloid 7DLGT medium pass
TOsin15G0010350 Alkaloid 7DLGT medium pass
TOsin16G0004150 Alkaloid 7DLGT high pass
TOsin16G0004170 Alkaloid 7DLGT medium pass
TOsin16G0004180 Alkaloid 7DLGT medium pass
TOsin16G0013200 Alkaloid 7DLGT low borderline
TOsin17G0002670 Alkaloid 7DLGT low borderline
TOsin17G0005910 Alkaloid 7DLGT low borderline
TOsin17G0005920 Alkaloid 7DLGT low borderline
TOsin17G0005930 Alkaloid 7DLGT low borderline
TOsin17G0005940 Alkaloid 7DLGT low borderline
TOsin17G0006650 Alkaloid 7DLGT low borderline
TOsin17G0007060 Alkaloid 7DLGT low borderline
TOsin17G0007070 Alkaloid 7DLGT low borderline
TOsin17G0007080 Alkaloid 7DLGT high pass
TOsin17G0007090 Alkaloid 7DLGT low borderline
TOsin17G0007170 Alkaloid 7DLGT high pass
TOsin17G0009920 Alkaloid 7DLGT low borderline
TOsin17G0014100 Alkaloid 7DLGT medium pass
TOsin17G0014120 Alkaloid 7DLGT low borderline
TOsin18G0001140 Alkaloid 7DLGT low borderline
TOsin18G0001150 Alkaloid 7DLGT low borderline
TOsin18G0005560 Alkaloid 7DLGT low borderline
TOsin18G0008420 Alkaloid 7DLGT high pass
TOsin18G0008460 Alkaloid 7DLGT medium pass
TOsin18G0008480 Alkaloid 7DLGT low borderline
TOsin18G0008990 Alkaloid 7DLGT medium pass
TOsin18G0009000 Alkaloid 7DLGT medium pass
TOsin19G0009380 Alkaloid 7DLGT low borderline
TOsin19G0009390 Alkaloid 7DLGT low borderline
TOsin20G0003780 Alkaloid 7DLGT low borderline
TOsin20G0011940 Alkaloid 7DLGT high pass
TOsin23G0008130 Alkaloid 7DLGT low borderline
TOsin23G0008780 Alkaloid 7DLGT medium pass
TOsin23G0020700 Alkaloid 7DLGT low borderline
TOsin23G0021350 Alkaloid 7DLGT low borderline
TOsin24G0000870 Alkaloid 7DLGT low borderline
TOsin24G0002900 Alkaloid 7DLGT low borderline
TOsin24G0003550 Alkaloid 7DLGT low borderline
TOsin24G0011590 Alkaloid 7DLGT low borderline
TOsin24G0014650 Alkaloid 7DLGT low borderline
TOsin24G0015660 Alkaloid 7DLGT medium pass
TOsin27G0006550 Alkaloid 7DLGT low borderline
TOsin27G0006620 Alkaloid 7DLGT medium pass
TOsin28G0002820 Alkaloid 7DLGT low borderline
TOsin28G0002840 Alkaloid 7DLGT low borderline
TOsin28G0003060 Alkaloid 7DLGT medium pass
TOsin28G0003080 Alkaloid 7DLGT medium pass
TOsinHiC_scaffold_1300001300 Alkaloid 7DLGT low borderline