PlantSME Plant secondary metabolism enzyme database

Toona sinensis (toona_sinensis)

Imported from atlas release summary for Toona sinensis.

1192
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 20 BAHD (162) View species results
Phenylpropanoid pathway 266 12 POD (149) View species results
Alkaloid pathway 231 23 NMT (62) View species results
Flavonoid pathway 164 14 UFGT (59) View species results
Steroid pathway 75 12 SMT1/SMT2/SMT3 (26) View species results
Rosmarinic acid pathway 74 7 4CL (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 930 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status Best Target
TOsin16G0003310 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
TOsin20G0001830 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
TOsin23G0017720 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
TOsin24G0006510 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
TOsin24G0019210 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin25G0005080 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin26G0007830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin27G0004180 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin27G0004260 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin28G0003020 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin28G0004910 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
TOsin09G0006520 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin11G0005230 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin11G0005330 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin14G0005410 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin15G0007580 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin16G0006860 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin16G0010920 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin18G0009630 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin19G0000540 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin20G0004280 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin20G0013070 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
TOsin03G0005080 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin04G0003590 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin09G0008670 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin14G0005450 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin15G0000510 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
TOsin15G0009230 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin16G0005260 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin16G0014070 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
TOsin21G0005100 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin23G0001170 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin23G0005750 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin23G0010280 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
TOsin23G0019120 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin24G0013290 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
TOsin24G0017770 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin24G0022550 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
TOsin25G0002340 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin26G0010550 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
TOsin26G0010560 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
TOsinHiC_scaffold_430004840 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
TOsin05G0006220 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
TOsin05G0006830 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
TOsin06G0002510 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
TOsin06G0003230 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
TOsin06G0003260 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
TOsin09G0002690 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
TOsin09G0002700 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
TOsin09G0002710 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH