PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aalp04G0036510 Alkaloid 8HGO low borderline
Aalp05G0003590 Alkaloid 8HGO low borderline
Aalp05G0024370 Alkaloid 8HGO low borderline
Aalp06G0004530 Alkaloid 8HGO medium borderline
Aalp06G0018140 Alkaloid 8HGO medium borderline
Aalp07G0029720 Alkaloid 8HGO medium borderline
Aalp07G0034060 Alkaloid 8HGO medium borderline
Aalp07G0034070 Alkaloid 8HGO medium borderline
Aalp08G0049180 Alkaloid 8HGO medium borderline
Aalp08G0049190 Alkaloid 8HGO low borderline
Aalp03G0034540 Alkaloid ADC medium pass
Aalp07G0006780 Alkaloid ADC medium pass
Aalp01G0000300 Alkaloid BBE medium borderline
Aalp01G0014860 Alkaloid BBE medium borderline
Aalp01G0032230 Alkaloid BBE medium borderline
Aalp01G0032250 Alkaloid BBE medium borderline
Aalp01G0038770 Alkaloid BBE medium borderline
Aalp01G0038780 Alkaloid BBE medium borderline
Aalp01G0038790 Alkaloid BBE medium borderline
Aalp01G0038800 Alkaloid BBE medium borderline
Aalp01G0038840 Alkaloid BBE medium borderline
Aalp04G0028800 Alkaloid BBE medium borderline
Aalp06G0012510 Alkaloid BBE medium borderline
Aalp06G0012530 Alkaloid BBE medium borderline
Aalp06G0012540 Alkaloid BBE medium borderline
Aalp06G0012600 Alkaloid BBE medium borderline
Aalp07G0036610 Alkaloid BBE medium borderline
Aalp07G0036830 Alkaloid BBE medium borderline
Aalp07G0036840 Alkaloid BBE medium borderline
Aalp07G0036860 Alkaloid BBE medium borderline
Aalp07G0036880 Alkaloid BBE medium borderline
Aalp07G0036890 Alkaloid BBE medium borderline
Aalp07G0036900 Alkaloid BBE medium borderline
Aalp08G0017250 Alkaloid BBE medium borderline
Aalp01G0018090 Alkaloid CNMT low borderline
Aalp01G0034230 Alkaloid CNMT low borderline
Aalp01G0035060 Alkaloid CNMT low borderline
Aalp03G0017820 Alkaloid CNMT low borderline
Aalp03G0027320 Alkaloid CNMT medium pass
Aalp03G0027350 Alkaloid CNMT low borderline
Aalp03G0035530 Alkaloid CNMT low borderline
Aalp04G0026150 Alkaloid CNMT low borderline
Aalp07G0009440 Alkaloid CNMT medium borderline
Aalp08G0000720 Alkaloid CNMT low borderline
Aalp01G0004330 Alkaloid CODM/T6ODM medium borderline
Aalp01G0004350 Alkaloid CODM/T6ODM medium borderline
Aalp01G0004360 Alkaloid CODM/T6ODM medium borderline
Aalp01G0005200 Alkaloid CODM/T6ODM medium borderline
Aalp01G0007080 Alkaloid CODM/T6ODM medium borderline
Aalp01G0007090 Alkaloid CODM/T6ODM medium borderline