PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aalp01G0007100 Alkaloid CODM/T6ODM medium borderline
Aalp01G0007110 Alkaloid CODM/T6ODM medium borderline
Aalp01G0020660 Alkaloid CODM/T6ODM medium borderline
Aalp01G0034530 Alkaloid CODM/T6ODM medium borderline
Aalp01G0038010 Alkaloid CODM/T6ODM medium borderline
Aalp01G0041360 Alkaloid CODM/T6ODM medium borderline
Aalp01G0041370 Alkaloid CODM/T6ODM medium borderline
Aalp02G0026740 Alkaloid CODM/T6ODM medium borderline
Aalp02G0027800 Alkaloid CODM/T6ODM medium borderline
Aalp02G0028980 Alkaloid CODM/T6ODM medium borderline
Aalp02G0029040 Alkaloid CODM/T6ODM medium borderline
Aalp02G0030100 Alkaloid CODM/T6ODM medium borderline
Aalp03G0014070 Alkaloid CODM/T6ODM medium borderline
Aalp03G0014990 Alkaloid CODM/T6ODM medium borderline
Aalp03G0022360 Alkaloid CODM/T6ODM medium borderline
Aalp03G0022380 Alkaloid CODM/T6ODM medium borderline
Aalp03G0022390 Alkaloid CODM/T6ODM medium borderline
Aalp03G0038290 Alkaloid CODM/T6ODM low borderline
Aalp04G0006360 Alkaloid CODM/T6ODM medium borderline
Aalp04G0009890 Alkaloid CODM/T6ODM medium borderline
Aalp04G0026050 Alkaloid CODM/T6ODM medium borderline
Aalp04G0026080 Alkaloid CODM/T6ODM medium borderline
Aalp04G0027700 Alkaloid CODM/T6ODM medium borderline
Aalp04G0031430 Alkaloid CODM/T6ODM medium borderline
Aalp04G0034130 Alkaloid CODM/T6ODM medium borderline
Aalp04G0039200 Alkaloid CODM/T6ODM medium borderline
Aalp05G0001590 Alkaloid CODM/T6ODM medium borderline
Aalp05G0001600 Alkaloid CODM/T6ODM medium borderline
Aalp05G0015140 Alkaloid CODM/T6ODM medium borderline
Aalp05G0024660 Alkaloid CODM/T6ODM medium borderline
Aalp05G0030910 Alkaloid CODM/T6ODM medium borderline
Aalp05G0032100 Alkaloid CODM/T6ODM medium borderline
Aalp06G0020370 Alkaloid CODM/T6ODM medium borderline
Aalp06G0023520 Alkaloid CODM/T6ODM medium borderline
Aalp06G0029700 Alkaloid CODM/T6ODM medium borderline
Aalp06G0029880 Alkaloid CODM/T6ODM medium borderline
Aalp07G0009120 Alkaloid CODM/T6ODM medium borderline
Aalp07G0026590 Alkaloid CODM/T6ODM medium borderline
Aalp07G0032510 Alkaloid CODM/T6ODM medium borderline
Aalp07G0035790 Alkaloid CODM/T6ODM medium borderline
Aalp08G0005950 Alkaloid CODM/T6ODM medium borderline
Aalp08G0006250 Alkaloid CODM/T6ODM medium borderline
Aalp08G0008000 Alkaloid CODM/T6ODM medium borderline
Aalp08G0014090 Alkaloid CODM/T6ODM medium borderline
Aalp08G0032730 Alkaloid CODM/T6ODM medium borderline
Aalp08G0042840 Alkaloid CODM/T6ODM medium borderline
Aalp08G0042860 Alkaloid CODM/T6ODM medium borderline
Aalp08G0042870 Alkaloid CODM/T6ODM medium borderline
Aalp08G0046590 Alkaloid CODM/T6ODM medium borderline
Aalp08G0054430 Alkaloid CODM/T6ODM medium borderline