PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1692
Candidate Protein Records
1406
Pathway-Level Records
3402
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aalpscaffold_1140000300 Alkaloid CODM/T6ODM medium borderline
Aalpscaffold_4710008770 Alkaloid CODM/T6ODM medium borderline
Aalp02G0008400 Alkaloid COR medium pass
Aalp02G0008410 Alkaloid COR medium pass
Aalp05G0021130 Alkaloid COR medium pass
Aalp07G0003450 Alkaloid COR medium pass
Aalp08G0000460 Alkaloid COR medium pass
Aalp08G0053090 Alkaloid COR medium pass
Aalpscaffold_4410008430 Alkaloid COR medium pass
Aalp01G0014530 Alkaloid CYP719 medium borderline
Aalp02G0016230 Alkaloid CYP719 medium borderline
Aalp03G0005320 Alkaloid CYP719 medium borderline
Aalp05G0003520 Alkaloid CYP719 low borderline
Aalp06G0014330 Alkaloid CYP719 medium borderline
Aalp06G0026280 Alkaloid CYP719 medium borderline
Aalp06G0030450 Alkaloid CYP719 medium borderline
Aalp02G0003320 Alkaloid CYP80B1 medium borderline
Aalp04G0039190 Alkaloid CYP80B1 medium borderline
Aalp04G0039220 Alkaloid CYP80B1 medium borderline
Aalp08G0047950 Alkaloid CYP80B1 medium borderline
Aalp01G0017180 Alkaloid CYP80F1 medium borderline
Aalp01G0032690 Alkaloid CYP80F1 medium borderline
Aalp05G0003800 Alkaloid CYP80F1 medium borderline
Aalp01G0017150 Alkaloid G8O/G8H medium borderline
Aalp02G0024600 Alkaloid G8O/G8H medium borderline
Aalp03G0024820 Alkaloid G8O/G8H medium pass
Aalp03G0024830 Alkaloid G8O/G8H medium pass
Aalp03G0031910 Alkaloid G8O/G8H low borderline
Aalp04G0005760 Alkaloid G8O/G8H medium pass
Aalp04G0005780 Alkaloid G8O/G8H medium borderline
Aalp04G0008190 Alkaloid G8O/G8H medium borderline
Aalp04G0010490 Alkaloid G8O/G8H medium borderline
Aalp04G0015080 Alkaloid G8O/G8H medium borderline
Aalp04G0017660 Alkaloid G8O/G8H medium borderline
Aalp04G0018260 Alkaloid G8O/G8H medium borderline
Aalp04G0033380 Alkaloid G8O/G8H low borderline
Aalp04G0039570 Alkaloid G8O/G8H low borderline
Aalp05G0006600 Alkaloid G8O/G8H medium borderline
Aalp06G0008880 Alkaloid G8O/G8H low borderline
Aalp06G0016790 Alkaloid G8O/G8H medium borderline
Aalp06G0026140 Alkaloid G8O/G8H medium borderline
Aalp07G0003110 Alkaloid G8O/G8H medium borderline
Aalp07G0013300 Alkaloid G8O/G8H medium borderline
Aalp07G0021790 Alkaloid G8O/G8H medium borderline
Aalp08G0004750 Alkaloid G8O/G8H medium borderline
Aalp08G0011990 Alkaloid G8O/G8H medium borderline
Aalp08G0040000 Alkaloid G8O/G8H medium borderline
Aalp08G0056210 Alkaloid G8O/G8H medium borderline
Aalp08G0057780 Alkaloid G8O/G8H medium borderline
Aalpscaffold_3020006400 Alkaloid G8O/G8H medium borderline