PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Bith1480036930 Rosmarinic Acid 4CL medium pass
Bith1660058200 Rosmarinic Acid 4CL medium pass
Bith1680064600 Rosmarinic Acid 4CL low borderline
Bith1760071410 Rosmarinic Acid 4CL medium pass
Bith1820082890 Rosmarinic Acid 4CL low borderline
Bith1880087040 Rosmarinic Acid 4CL medium pass
Bith1880087960 Rosmarinic Acid 4CL low borderline
Bith1930089960 Rosmarinic Acid 4CL medium pass
Bith2240118800 Rosmarinic Acid 4CL medium pass
Bith2580147450 Rosmarinic Acid 4CL low borderline
Bith260149210 Rosmarinic Acid 4CL medium pass
Bith2680158960 Rosmarinic Acid 4CL medium pass
Bith2680160540 Rosmarinic Acid 4CL low borderline
Bith320173130 Rosmarinic Acid 4CL low borderline
Bith320176270 Rosmarinic Acid 4CL low borderline
Bith320176370 Rosmarinic Acid 4CL medium pass
Bith40191620 Rosmarinic Acid 4CL medium pass
Bith500201090 Rosmarinic Acid 4CL medium pass
Bith500201950 Rosmarinic Acid 4CL medium pass
Bith50197750 Rosmarinic Acid 4CL medium pass
Bith50198560 Rosmarinic Acid 4CL medium pass
Bith60205120 Rosmarinic Acid 4CL low borderline
Bith610211270 Rosmarinic Acid 4CL medium pass
Bith680221560 Rosmarinic Acid 4CL low borderline
Bith70228180 Rosmarinic Acid 4CL low borderline
Bith790240950 Rosmarinic Acid 4CL low borderline
Bith790242610 Rosmarinic Acid 4CL low borderline
Bith923980260310 Rosmarinic Acid 4CL medium pass
Bith100012660 Rosmarinic Acid C4H medium pass
Bith100014840 Rosmarinic Acid C4H low borderline
Bith10003020 Rosmarinic Acid C4H low borderline
Bith10003060 Rosmarinic Acid C4H low borderline
Bith10007620 Rosmarinic Acid C4H low borderline
Bith10011050 Rosmarinic Acid C4H medium pass
Bith120021720 Rosmarinic Acid C4H low borderline
Bith130024050 Rosmarinic Acid C4H low borderline
Bith130025140 Rosmarinic Acid C4H medium pass
Bith130025290 Rosmarinic Acid C4H medium pass
Bith130026560 Rosmarinic Acid C4H low borderline
Bith130029750 Rosmarinic Acid C4H low borderline
Bith140033900 Rosmarinic Acid C4H low borderline
Bith1480037300 Rosmarinic Acid C4H low borderline
Bith1480037530 Rosmarinic Acid C4H low borderline
Bith1480038850 Rosmarinic Acid C4H low borderline
Bith1530048430 Rosmarinic Acid C4H low borderline
Bith1530048500 Rosmarinic Acid C4H low borderline
Bith1570049800 Rosmarinic Acid C4H low borderline
Bith1570052290 Rosmarinic Acid C4H medium pass
Bith1660059080 Rosmarinic Acid C4H medium pass
Bith1660061530 Rosmarinic Acid C4H medium pass