PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Bith1690067360 Rosmarinic Acid C4H low borderline
Bith1770072580 Rosmarinic Acid C4H low borderline
Bith1770072740 Rosmarinic Acid C4H medium pass
Bith1770072900 Rosmarinic Acid C4H low borderline
Bith1770073640 Rosmarinic Acid C4H low borderline
Bith1850085850 Rosmarinic Acid C4H medium pass
Bith1880087880 Rosmarinic Acid C4H low borderline
Bith1970090920 Rosmarinic Acid C4H low borderline
Bith1970091100 Rosmarinic Acid C4H low borderline
Bith1970092210 Rosmarinic Acid C4H medium pass
Bith1970096750 Rosmarinic Acid C4H low borderline
Bith1970098460 Rosmarinic Acid C4H low borderline
Bith1970098480 Rosmarinic Acid C4H low borderline
Bith1970098500 Rosmarinic Acid C4H medium pass
Bith2160103980 Rosmarinic Acid C4H medium pass
Bith2240119580 Rosmarinic Acid C4H medium pass
Bith2250120920 Rosmarinic Acid C4H low borderline
Bith2280122660 Rosmarinic Acid C4H low borderline
Bith2340123750 Rosmarinic Acid C4H low borderline
Bith2340125090 Rosmarinic Acid C4H medium pass
Bith2360126300 Rosmarinic Acid C4H low borderline
Bith2400130850 Rosmarinic Acid C4H low borderline
Bith2430133700 Rosmarinic Acid C4H low borderline
Bith2470134730 Rosmarinic Acid C4H low borderline
Bith2560140600 Rosmarinic Acid C4H low borderline
Bith2560141130 Rosmarinic Acid C4H low borderline
Bith2560143410 Rosmarinic Acid C4H low borderline
Bith2560144070 Rosmarinic Acid C4H low borderline
Bith2560144080 Rosmarinic Acid C4H low borderline
Bith2560144110 Rosmarinic Acid C4H low borderline
Bith2560144120 Rosmarinic Acid C4H low borderline
Bith2560144610 Rosmarinic Acid C4H low borderline
Bith2560144970 Rosmarinic Acid C4H medium pass
Bith2580146910 Rosmarinic Acid C4H low borderline
Bith2590148550 Rosmarinic Acid C4H low borderline
Bith260149260 Rosmarinic Acid C4H low borderline
Bith260149280 Rosmarinic Acid C4H low borderline
Bith260149290 Rosmarinic Acid C4H low borderline
Bith260149320 Rosmarinic Acid C4H medium pass
Bith260149360 Rosmarinic Acid C4H medium pass
Bith2670157130 Rosmarinic Acid C4H low borderline
Bith2690161460 Rosmarinic Acid C4H low borderline
Bith2690161730 Rosmarinic Acid C4H low borderline
Bith290164890 Rosmarinic Acid C4H medium pass
Bith290166040 Rosmarinic Acid C4H low borderline
Bith320173750 Rosmarinic Acid C4H medium pass
Bith320175730 Rosmarinic Acid C4H low borderline
Bith3310181920 Rosmarinic Acid C4H low borderline
Bith3310182400 Rosmarinic Acid C4H low borderline
Bith3470189280 Rosmarinic Acid C4H low borderline