PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Bith380190540 Rosmarinic Acid C4H low borderline
Bith460196230 Rosmarinic Acid C4H medium pass
Bith480196640 Rosmarinic Acid C4H medium pass
Bith480196650 Rosmarinic Acid C4H medium pass
Bith490196690 Rosmarinic Acid C4H low borderline
Bith500201960 Rosmarinic Acid C4H medium pass
Bith500202020 Rosmarinic Acid C4H low borderline
Bith50199860 Rosmarinic Acid C4H medium pass
Bith580203670 Rosmarinic Acid C4H medium pass
Bith600210440 Rosmarinic Acid C4H low borderline
Bith600210710 Rosmarinic Acid C4H low borderline
Bith610212560 Rosmarinic Acid C4H medium pass
Bith610212940 Rosmarinic Acid C4H low borderline
Bith640216430 Rosmarinic Acid C4H low borderline
Bith70223800 Rosmarinic Acid C4H low borderline
Bith70225030 Rosmarinic Acid C4H low borderline
Bith70226890 Rosmarinic Acid C4H low borderline
Bith710230950 Rosmarinic Acid C4H low borderline
Bith720233700 Rosmarinic Acid C4H low borderline
Bith830270244380 Rosmarinic Acid C4H medium pass
Bith90250200 Rosmarinic Acid C4H low borderline
Bith90250810 Rosmarinic Acid C4H medium pass
Bith90251210 Rosmarinic Acid C4H low borderline
Bith908380255760 Rosmarinic Acid C4H low borderline
Bith921550259120 Rosmarinic Acid C4H low borderline
Bith925520261280 Rosmarinic Acid C4H low borderline
Bith925820261390 Rosmarinic Acid C4H low borderline
Bith990264530 Rosmarinic Acid C4H medium pass
Bith990264570 Rosmarinic Acid C4H medium pass
Bith990265770 Rosmarinic Acid C4H medium pass
Bith100014080 Rosmarinic Acid CPR low borderline
Bith10011150 Rosmarinic Acid CPR medium pass
Bith1570052200 Rosmarinic Acid CPR medium pass
Bith1770073280 Rosmarinic Acid CPR medium pass
Bith2560142850 Rosmarinic Acid CPR medium pass
Bith260149020 Rosmarinic Acid HPPR medium pass
Bith100014580 Rosmarinic Acid PAL low borderline
Bith1760072010 Rosmarinic Acid PAL medium pass
Bith2910168600 Rosmarinic Acid PAL medium pass
Bith320176850 Rosmarinic Acid PAL medium pass
Bith3470187990 Rosmarinic Acid PAL medium pass
Bith50197570 Rosmarinic Acid PAL medium pass
Bith580203710 Rosmarinic Acid PAL medium pass
Bith580203730 Rosmarinic Acid PAL low borderline
Bith921610259150 Rosmarinic Acid PAL high pass
Bith990264920 Rosmarinic Acid PAL high pass
Bith130024630 Rosmarinic Acid RAS medium pass
Bith1480034510 Rosmarinic Acid RAS low borderline
Bith1690067210 Rosmarinic Acid RAS medium pass
Bith1770073260 Rosmarinic Acid RAS low borderline