PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Bith480196650 Phenylpropanoid C3'H/CYP98A medium borderline
Bith490196690 Phenylpropanoid C3'H/CYP98A medium borderline
Bith500201960 Phenylpropanoid C3'H/CYP98A medium borderline
Bith500202020 Phenylpropanoid C3'H/CYP98A medium borderline
Bith580203670 Phenylpropanoid C3'H/CYP98A medium borderline
Bith600210440 Phenylpropanoid C3'H/CYP98A low borderline
Bith600210710 Phenylpropanoid C3'H/CYP98A low borderline
Bith610212560 Phenylpropanoid C3'H/CYP98A medium borderline
Bith610212940 Phenylpropanoid C3'H/CYP98A low borderline
Bith620390215340 Phenylpropanoid C3'H/CYP98A low borderline
Bith640216430 Phenylpropanoid C3'H/CYP98A medium pass
Bith70223800 Phenylpropanoid C3'H/CYP98A medium pass
Bith70225030 Phenylpropanoid C3'H/CYP98A medium borderline
Bith70226890 Phenylpropanoid C3'H/CYP98A low borderline
Bith710230950 Phenylpropanoid C3'H/CYP98A low borderline
Bith720233700 Phenylpropanoid C3'H/CYP98A medium borderline
Bith830270244380 Phenylpropanoid C3'H/CYP98A medium borderline
Bith90250200 Phenylpropanoid C3'H/CYP98A low borderline
Bith90250230 Phenylpropanoid C3'H/CYP98A low borderline
Bith90250810 Phenylpropanoid C3'H/CYP98A medium borderline
Bith914860257160 Phenylpropanoid C3'H/CYP98A low borderline
Bith921550259120 Phenylpropanoid C3'H/CYP98A low borderline
Bith925520261280 Phenylpropanoid C3'H/CYP98A low borderline
Bith925820261390 Phenylpropanoid C3'H/CYP98A low borderline
Bith990265770 Phenylpropanoid C3'H/CYP98A medium borderline
Bith10003020 Phenylpropanoid C4H/CYP73A low borderline
Bith10003060 Phenylpropanoid C4H/CYP73A low borderline
Bith2560140600 Phenylpropanoid C4H/CYP73A low borderline
Bith2560143410 Phenylpropanoid C4H/CYP73A low borderline
Bith908380255760 Phenylpropanoid C4H/CYP73A low borderline
Bith990264530 Phenylpropanoid C4H/CYP73A medium borderline
Bith990264570 Phenylpropanoid C4H/CYP73A medium borderline
Bith10005770 Phenylpropanoid CAD low borderline
Bith1140510021430 Phenylpropanoid CAD low borderline
Bith1140530021440 Phenylpropanoid CAD low borderline
Bith1480034640 Phenylpropanoid CAD low borderline
Bith1760072090 Phenylpropanoid CAD medium pass
Bith1930090020 Phenylpropanoid CAD medium pass
Bith1930090030 Phenylpropanoid CAD medium pass
Bith1930090040 Phenylpropanoid CAD medium pass
Bith1970096580 Phenylpropanoid CAD low borderline
Bith2310123660 Phenylpropanoid CAD low borderline
Bith2480135680 Phenylpropanoid CAD medium pass
Bith2560143050 Phenylpropanoid CAD low borderline
Bith2580146640 Phenylpropanoid CAD medium borderline
Bith2580146650 Phenylpropanoid CAD medium borderline
Bith2580146660 Phenylpropanoid CAD medium borderline
Bith2600150400 Phenylpropanoid CAD medium pass
Bith410193370 Phenylpropanoid CAD medium borderline
Bith460196380 Phenylpropanoid CAD medium pass