PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Bith640217800 Phenylpropanoid CAD medium borderline
Bith680221490 Phenylpropanoid CAD low borderline
Bith70227630 Phenylpropanoid CAD medium borderline
Bith730237650 Phenylpropanoid CAD low borderline
Bith120022190 Phenylpropanoid CCR medium borderline
Bith1850086560 Phenylpropanoid CCR medium borderline
Bith1970095290 Phenylpropanoid CCR medium pass
Bith60209650 Phenylpropanoid CCR medium borderline
Bith610211920 Phenylpropanoid CCR medium pass
Bith90253790 Phenylpropanoid CCR low borderline
Bith2180106980 Phenylpropanoid CCoAOMT medium pass
Bith10011600 Phenylpropanoid COMT medium pass
Bith130025540 Phenylpropanoid COMT medium pass
Bith1490040440 Phenylpropanoid COMT medium pass
Bith1530046070 Phenylpropanoid COMT low borderline
Bith1660058860 Phenylpropanoid COMT medium pass
Bith1760071930 Phenylpropanoid COMT low borderline
Bith1970093620 Phenylpropanoid COMT medium pass
Bith1970093650 Phenylpropanoid COMT medium pass
Bith1970093680 Phenylpropanoid COMT medium pass
Bith1970093690 Phenylpropanoid COMT medium pass
Bith1970093720 Phenylpropanoid COMT medium pass
Bith1970093740 Phenylpropanoid COMT medium pass
Bith2620152450 Phenylpropanoid COMT low borderline
Bith310172750 Phenylpropanoid COMT medium pass
Bith3470188500 Phenylpropanoid COMT medium pass
Bith720233580 Phenylpropanoid COMT low borderline
Bith990265800 Phenylpropanoid COMT medium pass
Bith10005210 Phenylpropanoid CSE medium pass
Bith130026780 Phenylpropanoid CSE low borderline
Bith1760071900 Phenylpropanoid CSE medium pass
Bith2560139990 Phenylpropanoid CSE medium pass
Bith290166390 Phenylpropanoid CSE medium pass
Bith320176760 Phenylpropanoid CSE medium pass
Bith3320184570 Phenylpropanoid CSE medium pass
Bith790241320 Phenylpropanoid CSE medium pass
Bith90252460 Phenylpropanoid CSE medium pass
Bith130026560 Phenylpropanoid F5H/CYP84A medium borderline
Bith1790076890 Phenylpropanoid F5H/CYP84A medium borderline
Bith1970098460 Phenylpropanoid F5H/CYP84A medium borderline
Bith1970098480 Phenylpropanoid F5H/CYP84A medium borderline
Bith260149260 Phenylpropanoid F5H/CYP84A medium borderline
Bith260149280 Phenylpropanoid F5H/CYP84A medium borderline
Bith260149290 Phenylpropanoid F5H/CYP84A medium borderline
Bith260149350 Phenylpropanoid F5H/CYP84A medium pass
Bith2690161730 Phenylpropanoid F5H/CYP84A medium borderline
Bith50199860 Phenylpropanoid F5H/CYP84A medium borderline
Bith90251210 Phenylpropanoid F5H/CYP84A medium borderline
Bith00000620 Phenylpropanoid HCT low borderline
Bith130024630 Phenylpropanoid HCT medium pass