PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Bith1480034510 Phenylpropanoid HCT low borderline
Bith1690067210 Phenylpropanoid HCT medium pass
Bith1770073260 Phenylpropanoid HCT medium pass
Bith1770076330 Phenylpropanoid HCT medium pass
Bith1920089070 Phenylpropanoid HCT medium pass
Bith20100900 Phenylpropanoid HCT low borderline
Bith2270122260 Phenylpropanoid HCT medium pass
Bith2670156250 Phenylpropanoid HCT medium pass
Bith2670157250 Phenylpropanoid HCT low borderline
Bith40192270 Phenylpropanoid HCT medium pass
Bith680221150 Phenylpropanoid HCT medium pass
Bith70227360 Phenylpropanoid HCT low borderline
Bith720235870 Phenylpropanoid HCT low borderline
Bith100014160 Phenylpropanoid LAC low borderline
Bith100014170 Phenylpropanoid LAC low borderline
Bith1121420021320 Phenylpropanoid LAC medium pass
Bith1124580021330 Phenylpropanoid LAC medium pass
Bith130026830 Phenylpropanoid LAC low borderline
Bith1790079060 Phenylpropanoid LAC low borderline
Bith1790080170 Phenylpropanoid LAC medium pass
Bith1790080180 Phenylpropanoid LAC medium pass
Bith1970096440 Phenylpropanoid LAC medium pass
Bith2150103610 Phenylpropanoid LAC medium pass
Bith2380128790 Phenylpropanoid LAC medium pass
Bith2380128800 Phenylpropanoid LAC medium pass
Bith2400130290 Phenylpropanoid LAC medium pass
Bith2430133770 Phenylpropanoid LAC medium pass
Bith2520137670 Phenylpropanoid LAC medium pass
Bith2560142700 Phenylpropanoid LAC medium pass
Bith300172260 Phenylpropanoid LAC medium pass
Bith919780258410 Phenylpropanoid LAC medium pass
Bith100014580 Phenylpropanoid PAL low borderline
Bith1760072010 Phenylpropanoid PAL medium pass
Bith2910168600 Phenylpropanoid PAL medium pass
Bith320176850 Phenylpropanoid PAL medium pass
Bith3470187990 Phenylpropanoid PAL medium pass
Bith50197570 Phenylpropanoid PAL medium pass
Bith580203710 Phenylpropanoid PAL medium pass
Bith580203730 Phenylpropanoid PAL low borderline
Bith921610259150 Phenylpropanoid PAL high pass
Bith990264920 Phenylpropanoid PAL high pass
Bith100014210 Phenylpropanoid POD medium pass
Bith100014400 Phenylpropanoid POD medium pass
Bith10003320 Phenylpropanoid POD medium pass
Bith10003330 Phenylpropanoid POD medium pass
Bith10004850 Phenylpropanoid POD medium pass
Bith10010000 Phenylpropanoid POD medium pass
Bith1030015890 Phenylpropanoid POD low borderline
Bith1030016310 Phenylpropanoid POD medium pass
Bith1060017670 Phenylpropanoid POD medium pass