PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

652
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status
Bith2230110580 Terpenoid CYP76 medium pass
Bith2240119580 Terpenoid CYP76 medium borderline
Bith2340125090 Terpenoid CYP76 medium pass
Bith2360126300 Terpenoid CYP76 low borderline
Bith2400130850 Terpenoid CYP76 low borderline
Bith2430133700 Terpenoid CYP76 low borderline
Bith2470134730 Terpenoid CYP76 medium borderline
Bith2560141130 Terpenoid CYP76 medium borderline
Bith2560144970 Terpenoid CYP76 medium borderline
Bith260149260 Terpenoid CYP76 low borderline
Bith260149270 Terpenoid CYP76 medium pass
Bith260149280 Terpenoid CYP76 low borderline
Bith260149290 Terpenoid CYP76 low borderline
Bith260149320 Terpenoid CYP76 medium pass
Bith260149350 Terpenoid CYP76 medium pass
Bith260149360 Terpenoid CYP76 medium borderline
Bith2620152660 Terpenoid CYP76 medium pass
Bith2670157130 Terpenoid CYP76 low borderline
Bith2690161460 Terpenoid CYP76 medium pass
Bith290164890 Terpenoid CYP76 medium borderline
Bith320173750 Terpenoid CYP76 medium borderline
Bith320175730 Terpenoid CYP76 low borderline
Bith420194370 Terpenoid CYP76 low borderline
Bith460196230 Terpenoid CYP76 medium borderline
Bith480196640 Terpenoid CYP76 medium borderline
Bith480196650 Terpenoid CYP76 medium borderline
Bith490196690 Terpenoid CYP76 medium borderline
Bith500201960 Terpenoid CYP76 medium pass
Bith500202020 Terpenoid CYP76 medium borderline
Bith50199860 Terpenoid CYP76 medium pass
Bith580203670 Terpenoid CYP76 medium borderline
Bith600210440 Terpenoid CYP76 low borderline
Bith60207910 Terpenoid CYP76 low borderline
Bith610212560 Terpenoid CYP76 medium pass
Bith640216430 Terpenoid CYP76 medium borderline
Bith70223800 Terpenoid CYP76 low borderline
Bith70225030 Terpenoid CYP76 medium borderline
Bith720233700 Terpenoid CYP76 medium borderline
Bith830270244380 Terpenoid CYP76 medium borderline
Bith90250810 Terpenoid CYP76 medium pass
Bith90251210 Terpenoid CYP76 low borderline
Bith990264530 Terpenoid CYP76 medium pass
Bith990264570 Terpenoid CYP76 medium pass
Bith990265770 Terpenoid CYP76 medium pass
Bith1960090360 Terpenoid DXR low borderline
Bith1970097100 Terpenoid DXR high pass
Bith2240115110 Terpenoid DXR high pass
Bith1880087750 Terpenoid DXS medium pass
Bith60205620 Terpenoid DXS medium pass
Bith1970099160 Terpenoid FPPS medium pass