PlantSME Plant secondary metabolism enzyme database

Bartramia ithyphylla (bartramia_ithyphylla)

Imported from atlas release summary for Bartramia ithyphylla.

922
Candidate Protein Records
652
Pathway-Level Records
1736
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 168 12 POD (80) View species results
Terpenoid pathway 161 19 BAHD (59) View species results
Alkaloid pathway 136 19 NMT (26) View species results
Flavonoid pathway 87 10 UFGT (29) View species results
Rosmarinic acid pathway 67 7 C4H (31) View species results
Steroid pathway 33 12 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 660 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 122 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bith2240116030 Terpenoid FPPS low borderline
Bith2240116040 Terpenoid FPPS medium pass
Bith610211440 Terpenoid FPPS medium pass
Bith1070020410 Terpenoid GGPPS medium borderline
Bith1600056830 Terpenoid GGPPS medium borderline
Bith3310180940 Terpenoid GGPPS medium borderline
Bith610212220 Terpenoid GGPPS medium borderline
Bith70224460 Terpenoid GGPPS medium borderline
Bith2340124640 Terpenoid HDR/IspH high pass
Bith2910167890 Terpenoid HDR/IspH high pass
Bith640217790 Terpenoid HDR/IspH high pass
Bith700229640 Terpenoid HDR/IspH medium pass
Bith700229650 Terpenoid HDR/IspH medium pass
Bith1980100110 Terpenoid HDS/IspG medium pass
Bith30171130 Terpenoid HDS/IspG high pass
Bith3360185380 Terpenoid HDS/IspG medium pass
Bith3360185390 Terpenoid HDS/IspG medium pass
Bith40193000 Terpenoid HDS/IspG high pass
Bith2600150770 Terpenoid HMGR low borderline
Bith710230420 Terpenoid HMGR medium pass
Bith410193480 Terpenoid HMGS high pass
Bith380190600 Terpenoid IDI medium pass
Bith2240116090 Terpenoid MCT/IspD high pass
Bith560203150 Terpenoid MCT/IspD low borderline
Bith2180105700 Terpenoid MDS/IspF high pass
Bith330179830 Terpenoid MVD low borderline
Bith70225510 Terpenoid MVD medium pass
Bith3320184060 Terpenoid MVK medium pass
Bith70223810 Terpenoid MVK low borderline
Bith70228620 Terpenoid MVK medium pass
Bith720235670 Terpenoid MVK low borderline
Bith2010102110 Terpenoid PMK high pass
Bith1970090960 Terpenoid TPS low borderline
Bith1970090970 Terpenoid TPS low borderline
Bith2680158370 Terpenoid TPS medium pass
Bith2680158380 Terpenoid TPS medium pass
Bith2680158390 Terpenoid TPS medium pass
Bith90253210 Terpenoid TPS medium pass
Bith10007330 Terpenoid UGT medium pass
Bith10011550 Terpenoid UGT low borderline
Bith10012120 Terpenoid UGT medium pass
Bith10012150 Terpenoid UGT medium pass
Bith1070019060 Terpenoid UGT medium pass
Bith1312880032210 Terpenoid UGT low borderline
Bith1312890032220 Terpenoid UGT low borderline
Bith1490041040 Terpenoid UGT medium pass
Bith1690066800 Terpenoid UGT medium pass
Bith1690066810 Terpenoid UGT medium pass
Bith1770076100 Terpenoid UGT medium pass
Bith1790079240 Terpenoid UGT medium pass