Calliergon cordifolium (calliergon_cordifolium)
Imported from atlas release summary for Calliergon cordifolium.
1206
Candidate Protein Records
877
Pathway-Level Records
2234
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2234
Family-Level Calls
C4H
7.16%
POD
5.86%
4CL
5.51%
C3'H/CYP98A
5.28%
BAHD
5.19%
CYP76
4.07%
NMT
3.49%
IFS
2.95%
Other Families
60.47%
More Families (96)
F3H
60
2.69%
PAL
60
2.69%
BR6OX2/CYP85A2
51
2.28%
DWF4/CYP90B1
51
2.28%
STR
49
2.19%
F3'H/CYP75B
47
2.1%
GS
45
2.01%
IFR
43
1.92%
T3O
41
1.84%
CODM/T6ODM
39
1.75%
UGT
38
1.7%
PYKS
35
1.57%
7DLGT
31
1.39%
IO
31
1.39%
UFGT
31
1.39%
CAD
30
1.34%
CAS
28
1.25%
H6H
27
1.21%
TRI/TRII
25
1.12%
T16H
25
1.12%
CHS
24
1.07%
CYP71
24
1.07%
G8O/G8H
22
0.98%
SMT1/SMT2/SMT3
22
0.98%
COMT
21
0.94%
F3'5'H/CYP75A
20
0.9%
CSE
18
0.81%
NCS
17
0.76%
CYP90D1
17
0.76%
CPD/CYP90A1
17
0.76%
7DLH
16
0.72%
SLS
16
0.72%
ANR
16
0.72%
FNS
15
0.67%
CCR
13
0.58%
HCT
13
0.58%
8HGO
11
0.49%
LAC
11
0.49%
RAS
10
0.45%
PMT
9
0.4%
SGD
9
0.4%
F5H/CYP84A
9
0.4%
CYP719
8
0.36%
BBE
8
0.36%
CNMT
8
0.36%
DWF5
8
0.36%
SQS/FDFT1
8
0.36%
AACT
8
0.36%
TDC
7
0.31%
16OMT
7
0.31%
CPR
7
0.31%
LAMT
6
0.27%
COR
6
0.27%
TAT
6
0.27%
CYP80B1
5
0.22%
ADC
5
0.22%
TYDC_DDC
5
0.22%
MPO
5
0.22%
DFR
5
0.22%
ANS/LDOX
5
0.22%
BR6OX1/CYP85A1
5
0.22%
MVK
5
0.22%
GGPPS
5
0.22%
6OMT_4OMT_SOMT
4
0.18%
CHI
4
0.18%
DWF1
4
0.18%
CPI1
4
0.18%
SQE
4
0.18%
PMK
4
0.18%
HDS/IspG
4
0.18%
MVD
4
0.18%
GES
3
0.13%
FLS
3
0.13%
HPPR
3
0.13%
ROT3/CYP90C1
3
0.13%
DET2
3
0.13%
MCT/IspD
3
0.13%
CMK/IspE
3
0.13%
FPPS
3
0.13%
XMT_MXMT_DXMT
2
0.09%
CYP80F1
2
0.09%
CCoAOMT
2
0.09%
FK
2
0.09%
DWF7
2
0.09%
DXS
2
0.09%
IDI
2
0.09%
TPS
2
0.09%
HMGS
2
0.09%
ISY
1
0.04%
CYP51G1
1
0.04%
HYD1
1
0.04%
SMO1/SMO2
1
0.04%
GPPS
1
0.04%
HDR/IspH
1
0.04%
MDS/IspF
1
0.04%
HMGR
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 238 | 10 | POD (125) | View species results |
| Terpenoid pathway | 204 | 18 | BAHD (82) | View species results |
| Alkaloid pathway | 167 | 23 | NMT (34) | View species results |
| Flavonoid pathway | 111 | 9 | 4CL (26) | View species results |
| Rosmarinic acid pathway | 94 | 7 | 4CL (26) | View species results |
| Steroid pathway | 63 | 15 | CAS (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 846 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 139 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Ccor2568080202000 | Alkaloid | NMT | medium | borderline |
| Ccor2575240208770 | Alkaloid | NMT | medium | borderline |
| Ccor2578970213850 | Alkaloid | NMT | low | borderline |
| Ccor2583870218120 | Alkaloid | NMT | medium | pass |
| Ccor2587270221870 | Alkaloid | NMT | medium | pass |
| Ccor2588440223370 | Alkaloid | NMT | medium | pass |
| Ccor2611150249520 | Alkaloid | NMT | medium | borderline |
| Ccor2613320253210 | Alkaloid | NMT | low | borderline |
| Ccor2614470255160 | Alkaloid | NMT | medium | pass |
| Ccor2615380256780 | Alkaloid | NMT | medium | borderline |
| Ccor2616090257860 | Alkaloid | NMT | medium | pass |
| Ccor2616320258390 | Alkaloid | NMT | low | borderline |
| Ccor2617120259540 | Alkaloid | NMT | medium | pass |
| Ccor2618560261700 | Alkaloid | NMT | medium | borderline |
| Ccor2618560261730 | Alkaloid | NMT | medium | borderline |
| Ccor2619140262770 | Alkaloid | NMT | medium | pass |
| Ccor2621820267510 | Alkaloid | NMT | low | borderline |
| Ccor2622160268310 | Alkaloid | NMT | medium | pass |
| Ccor2623380270570 | Alkaloid | NMT | low | borderline |
| Ccor2628600279710 | Alkaloid | NMT | low | borderline |
| Ccor2628760280000 | Alkaloid | NMT | medium | pass |
| Ccor2628760280010 | Alkaloid | NMT | medium | pass |
| Ccor2632010287900 | Alkaloid | NMT | low | borderline |
| Ccor2634680295740 | Alkaloid | NMT | low | borderline |
| Ccor2636280301030 | Alkaloid | NMT | medium | pass |
| Ccor2640710314440 | Alkaloid | NMT | low | borderline |
| Ccor2642350320280 | Alkaloid | NMT | medium | pass |
| Ccor2643180322820 | Alkaloid | NMT | medium | pass |
| Ccor2645290330390 | Alkaloid | NMT | medium | pass |
| Ccor2646500333820 | Alkaloid | NMT | medium | borderline |
| Ccor2647150335230 | Alkaloid | NMT | medium | pass |
| Ccor2648010336540 | Alkaloid | NMT | medium | pass |
| Ccor2689110343560 | Alkaloid | NMT | medium | pass |
| Ccor2689120343570 | Alkaloid | NMT | medium | pass |
| Ccor2689960343780 | Alkaloid | NMT | medium | pass |
| Ccor1560870012030 | Alkaloid | PMT | medium | borderline |
| Ccor1660290030050 | Alkaloid | PMT | medium | pass |
| Ccor1760320034970 | Alkaloid | PMT | low | borderline |
| Ccor2279900086270 | Alkaloid | PMT | medium | pass |
| Ccor2567580201850 | Alkaloid | PMT | medium | pass |
| Ccor2570240203720 | Alkaloid | PMT | medium | pass |
| Ccor2599660234280 | Alkaloid | PMT | low | borderline |
| Ccor2686050343240 | Alkaloid | PMT | medium | borderline |
| Ccor2686070343270 | Alkaloid | PMT | medium | borderline |
| Ccor1548620010630 | Alkaloid | PYKS | low | borderline |
| Ccor1574440014290 | Alkaloid | PYKS | low | borderline |
| Ccor1580640016100 | Alkaloid | PYKS | high | pass |
| Ccor1623550023950 | Alkaloid | PYKS | medium | pass |
| Ccor1629830025090 | Alkaloid | PYKS | low | borderline |
| Ccor1652870029240 | Alkaloid | PYKS | medium | pass |