PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Ccusscaffold_60196550 Phenylpropanoid 4CL low borderline
Ccusscaffold_70213460 Phenylpropanoid 4CL low borderline
Ccusscaffold_80229360 Phenylpropanoid 4CL medium pass
Ccusscaffold_90245190 Phenylpropanoid 4CL low borderline
Ccusscaffold_90249760 Phenylpropanoid 4CL low borderline
Ccusscaffold_90254030 Phenylpropanoid 4CL medium pass
Ccusscaffold_90254040 Phenylpropanoid 4CL medium pass
Ccusscaffold_90254360 Phenylpropanoid 4CL low borderline
Ccusscaffold_10003430 Rosmarinic Acid 4CL low borderline
Ccusscaffold_100036210 Rosmarinic Acid 4CL medium pass
Ccusscaffold_100041260 Rosmarinic Acid 4CL low borderline
Ccusscaffold_10012480 Rosmarinic Acid 4CL low borderline
Ccusscaffold_10015520 Rosmarinic Acid 4CL low borderline
Ccusscaffold_110050180 Rosmarinic Acid 4CL low borderline
Ccusscaffold_110053750 Rosmarinic Acid 4CL low borderline
Ccusscaffold_20073790 Rosmarinic Acid 4CL medium pass
Ccusscaffold_40099740 Rosmarinic Acid 4CL low borderline
Ccusscaffold_40113010 Rosmarinic Acid 4CL medium pass
Ccusscaffold_50125270 Rosmarinic Acid 4CL medium pass
Ccusscaffold_50127260 Rosmarinic Acid 4CL medium pass
Ccusscaffold_50129880 Rosmarinic Acid 4CL medium pass
Ccusscaffold_50133830 Rosmarinic Acid 4CL low borderline
Ccusscaffold_50136910 Rosmarinic Acid 4CL medium pass
Ccusscaffold_50137260 Rosmarinic Acid 4CL low borderline
Ccusscaffold_60161110 Rosmarinic Acid 4CL medium pass
Ccusscaffold_60165130 Rosmarinic Acid 4CL medium pass
Ccusscaffold_60165990 Rosmarinic Acid 4CL medium pass
Ccusscaffold_60178680 Rosmarinic Acid 4CL low borderline
Ccusscaffold_60194210 Rosmarinic Acid 4CL low borderline
Ccusscaffold_60196550 Rosmarinic Acid 4CL low borderline
Ccusscaffold_70213460 Rosmarinic Acid 4CL low borderline
Ccusscaffold_80229360 Rosmarinic Acid 4CL medium pass
Ccusscaffold_90245190 Rosmarinic Acid 4CL low borderline
Ccusscaffold_90249760 Rosmarinic Acid 4CL low borderline
Ccusscaffold_90254030 Rosmarinic Acid 4CL medium pass
Ccusscaffold_90254040 Rosmarinic Acid 4CL medium pass
Ccusscaffold_90254360 Rosmarinic Acid 4CL low borderline