PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Ccusscaffold_60192830 Alkaloid 7DLH medium borderline
Ccusscaffold_80219450 Alkaloid 7DLH medium borderline
Ccusscaffold_80219460 Alkaloid 7DLH medium borderline
Ccusscaffold_90245900 Alkaloid 7DLH medium borderline
Ccusscaffold_90245910 Alkaloid 7DLH medium borderline
Ccusscaffold_100033400 Alkaloid 8HGO medium borderline
Ccusscaffold_20076990 Alkaloid 8HGO medium borderline
Ccusscaffold_30085830 Alkaloid 8HGO medium borderline
Ccusscaffold_50134240 Alkaloid 8HGO medium borderline
Ccusscaffold_50140870 Alkaloid 8HGO medium borderline
Ccusscaffold_50147420 Alkaloid 8HGO medium borderline
Ccusscaffold_60170490 Alkaloid 8HGO low borderline
Ccusscaffold_70203570 Alkaloid 8HGO medium borderline
Ccusscaffold_80220110 Alkaloid 8HGO low borderline
Ccusscaffold_110048880 Alkaloid ADC medium pass
Ccusscaffold_60176050 Alkaloid ADC low borderline
Ccusscaffold_90259620 Alkaloid ADC medium pass
Ccusscaffold_40090100 Alkaloid BBE low borderline
Ccusscaffold_40108240 Alkaloid BBE low borderline
Ccusscaffold_50141630 Alkaloid BBE low borderline
Ccusscaffold_50150380 Alkaloid BBE low borderline
Ccusscaffold_60189250 Alkaloid BBE low borderline
Ccusscaffold_100030930 Alkaloid CNMT low borderline
Ccusscaffold_100038330 Alkaloid CNMT medium borderline
Ccusscaffold_20081250 Alkaloid CNMT low borderline
Ccusscaffold_40092880 Alkaloid CNMT low borderline
Ccusscaffold_60192250 Alkaloid CNMT low borderline
Ccusscaffold_90259400 Alkaloid CNMT low borderline
Ccusscaffold_90269480 Alkaloid CNMT low borderline
Ccusscaffold_100028700 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_10012040 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_110044700 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_110045010 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_110055530 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_110059690 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_20069620 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_40091610 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_40093460 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_40093930 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_50121520 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_50123810 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_60160540 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_60175180 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_60191810 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_60196980 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_70214460 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_90239230 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_90239240 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_90239330 Alkaloid CODM/T6ODM medium borderline
Ccusscaffold_90269710 Alkaloid CODM/T6ODM medium borderline