PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Ccusscaffold_110055530 Flavonoid F3H medium borderline
Ccusscaffold_110059630 Flavonoid F3H low borderline
Ccusscaffold_110059690 Flavonoid F3H medium borderline
Ccusscaffold_20069620 Flavonoid F3H medium borderline
Ccusscaffold_40089420 Flavonoid F3H medium borderline
Ccusscaffold_40091610 Flavonoid F3H medium borderline
Ccusscaffold_40093460 Flavonoid F3H medium borderline
Ccusscaffold_40093930 Flavonoid F3H medium borderline
Ccusscaffold_40093940 Flavonoid F3H medium borderline
Ccusscaffold_50118980 Flavonoid F3H medium borderline
Ccusscaffold_50121520 Flavonoid F3H medium borderline
Ccusscaffold_50123810 Flavonoid F3H medium pass
Ccusscaffold_50134630 Flavonoid F3H low borderline
Ccusscaffold_50147260 Flavonoid F3H medium pass
Ccusscaffold_50157770 Flavonoid F3H low borderline
Ccusscaffold_50158410 Flavonoid F3H medium borderline
Ccusscaffold_60160540 Flavonoid F3H medium pass
Ccusscaffold_60175180 Flavonoid F3H medium borderline
Ccusscaffold_60191810 Flavonoid F3H medium borderline
Ccusscaffold_60196980 Flavonoid F3H low borderline
Ccusscaffold_70206260 Flavonoid F3H low borderline
Ccusscaffold_70214460 Flavonoid F3H medium borderline
Ccusscaffold_90236760 Flavonoid F3H low borderline
Ccusscaffold_90239230 Flavonoid F3H medium borderline
Ccusscaffold_90239240 Flavonoid F3H medium borderline
Ccusscaffold_90239330 Flavonoid F3H medium borderline
Ccusscaffold_90257190 Flavonoid F3H medium borderline
Ccusscaffold_90269710 Flavonoid F3H medium borderline
Ccusscaffold_90270390 Flavonoid F3H medium pass
Ccusscaffold_110044690 Flavonoid FLS medium borderline
Ccusscaffold_110059710 Flavonoid FLS medium borderline
Ccusscaffold_90240080 Flavonoid FLS medium pass
Ccusscaffold_10012030 Flavonoid FNS medium borderline
Ccusscaffold_110047060 Flavonoid FNS medium borderline
Ccusscaffold_110051670 Flavonoid FNS medium borderline
Ccusscaffold_110056690 Flavonoid FNS medium borderline
Ccusscaffold_110058380 Flavonoid FNS medium borderline
Ccusscaffold_20083190 Flavonoid FNS medium borderline
Ccusscaffold_30085860 Flavonoid FNS medium borderline
Ccusscaffold_30085870 Flavonoid FNS medium borderline
Ccusscaffold_40095890 Flavonoid FNS low borderline
Ccusscaffold_40112580 Flavonoid FNS medium borderline
Ccusscaffold_50119460 Flavonoid FNS medium pass
Ccusscaffold_50121280 Flavonoid FNS medium borderline
Ccusscaffold_50157980 Flavonoid FNS medium borderline
Ccusscaffold_10000670 Flavonoid IFR low borderline
Ccusscaffold_100022870 Flavonoid IFR low borderline
Ccusscaffold_100025180 Flavonoid IFR low borderline
Ccusscaffold_100032540 Flavonoid IFR low borderline
Ccusscaffold_100032780 Flavonoid IFR low borderline