PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Ccusscaffold_60193860 Steroid HYD1 high pass
Ccusscaffold_110058390 Steroid ROT3/CYP90C1 low borderline
Ccusscaffold_40110930 Steroid ROT3/CYP90C1 medium borderline
Ccusscaffold_90242750 Steroid ROT3/CYP90C1 low borderline
Ccusscaffold_90247340 Steroid ROT3/CYP90C1 low borderline
Ccusscaffold_40107410 Steroid SMO1/SMO2 medium pass
Ccusscaffold_60169210 Steroid SMO1/SMO2 medium pass
Ccusscaffold_100034460 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_120061810 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_130065760 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_20082520 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_20082640 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_40099650 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_40110000 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_50128500 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_50148380 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_60167760 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_60169170 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_60193500 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_70203300 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_70205100 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_70214730 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_80230640 Steroid SMT1/SMT2/SMT3 medium pass
Ccusscaffold_80232630 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_90243770 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_90244490 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_90269990 Steroid SMT1/SMT2/SMT3 low borderline
Ccusscaffold_100028770 Steroid SQE low borderline
Ccusscaffold_20071880 Steroid SQE low borderline
Ccusscaffold_60195560 Steroid SQE medium pass
Ccusscaffold_100024210 Steroid SQS/FDFT1 low borderline
Ccusscaffold_110056210 Steroid SQS/FDFT1 high pass
Ccusscaffold_50121760 Steroid SQS/FDFT1 high pass
Ccusscaffold_80218320 Steroid SQS/FDFT1 medium pass
Ccusscaffold_80220530 Steroid SQS/FDFT1 medium pass
Ccusscaffold_90239210 Steroid SQS/FDFT1 high pass