PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
Ccusscaffold_50131820 Alkaloid IO medium borderline
Ccusscaffold_50137800 Alkaloid IO medium borderline
Ccusscaffold_50142010 Alkaloid IO medium borderline
Ccusscaffold_50143300 Alkaloid IO medium borderline
Ccusscaffold_50156500 Alkaloid IO medium borderline
Ccusscaffold_60169540 Alkaloid IO low borderline
Ccusscaffold_60183740 Alkaloid IO medium borderline
Ccusscaffold_60183770 Alkaloid IO medium borderline
Ccusscaffold_60196950 Alkaloid IO medium borderline
Ccusscaffold_70208850 Alkaloid IO medium borderline
Ccusscaffold_90235820 Alkaloid IO medium borderline
Ccusscaffold_90243680 Alkaloid IO low borderline
Ccusscaffold_90269120 Alkaloid IO medium borderline
Ccusscaffold_90271040 Alkaloid IO low borderline
Ccusscaffold_90268120 Alkaloid ISY medium pass
Ccusscaffold_100027870 Alkaloid LAMT low borderline
Ccusscaffold_110042610 Alkaloid LAMT medium borderline
Ccusscaffold_110042640 Alkaloid LAMT medium borderline
Ccusscaffold_110042650 Alkaloid LAMT medium borderline
Ccusscaffold_110042660 Alkaloid LAMT medium borderline
Ccusscaffold_110042820 Alkaloid LAMT medium pass
Ccusscaffold_110043570 Alkaloid LAMT medium borderline
Ccusscaffold_50120340 Alkaloid LAMT medium pass
Ccusscaffold_50122890 Alkaloid LAMT medium borderline
Ccusscaffold_80216830 Alkaloid LAMT medium pass
Ccusscaffold_90247920 Alkaloid LAMT low borderline
Ccusscaffold_90254750 Alkaloid LAMT low borderline
Ccusscaffold_100034810 Alkaloid MPO medium pass
Ccusscaffold_10008860 Alkaloid MPO high pass
Ccusscaffold_10008950 Alkaloid MPO medium pass
Ccusscaffold_10008960 Alkaloid MPO medium pass
Ccusscaffold_80216410 Alkaloid MPO medium pass
Ccusscaffold_80222500 Alkaloid MPO high pass
Ccusscaffold_100029880 Alkaloid NCS medium borderline
Ccusscaffold_100034350 Alkaloid NCS medium borderline
Ccusscaffold_110059630 Alkaloid NCS medium borderline
Ccusscaffold_110059710 Alkaloid NCS medium borderline
Ccusscaffold_40111160 Alkaloid NCS low borderline
Ccusscaffold_50157770 Alkaloid NCS medium borderline
Ccusscaffold_50159200 Alkaloid NCS low borderline
Ccusscaffold_60188290 Alkaloid NCS low borderline
Ccusscaffold_90236760 Alkaloid NCS medium borderline
Ccusscaffold_90255380 Alkaloid NCS low borderline
Ccusscaffold_90255500 Alkaloid NCS low borderline
Ccusscaffold_10001150 Alkaloid NMT medium pass
Ccusscaffold_100028250 Alkaloid NMT medium borderline
Ccusscaffold_100028260 Alkaloid NMT medium borderline
Ccusscaffold_100030910 Alkaloid NMT medium borderline
Ccusscaffold_100032360 Alkaloid NMT medium borderline
Ccusscaffold_100036310 Alkaloid NMT medium pass