PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
Ccusscaffold_60190970 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Ccusscaffold_70201950 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Ccusscaffold_70208540 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Ccusscaffold_70211570 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Ccusscaffold_80228770 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Ccusscaffold_10005050 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_10012030 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_30085860 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_30085870 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_40112530 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_40112550 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_40112580 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_50128730 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_50131820 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_60165140 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Ccusscaffold_100021920 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_110049030 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_110049070 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_50125950 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_70203150 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_70210210 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_90253100 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_90258210 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Ccusscaffold_90269020 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Ccusscaffold_100022080 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Ccusscaffold_10014260 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Ccusscaffold_110054950 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Ccusscaffold_50120000 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Ccusscaffold_50120010 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Ccusscaffold_50147480 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Ccusscaffold_50154750 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Ccusscaffold_90253570 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Ccusscaffold_100025930 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_100029600 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_100036000 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_110050360 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_110050390 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_110050420 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_110053300 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_110053340 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_110053370 Phenylpropanoid PAL medium pass PAL__00003__sp_P45724_PAL2_ARATH
Ccusscaffold_110053410 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_130065100 Phenylpropanoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_30087060 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_40103360 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Ccusscaffold_50143370 Phenylpropanoid PAL low borderline PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_50143380 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_70201000 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_70201050 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Ccusscaffold_90262020 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR