PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Ccusscaffold_30085850 Flavonoid IFS low borderline
Ccusscaffold_30085880 Flavonoid IFS low borderline
Ccusscaffold_40110930 Flavonoid IFS low borderline
Ccusscaffold_50115670 Flavonoid IFS low borderline
Ccusscaffold_50118960 Flavonoid IFS medium borderline
Ccusscaffold_50118970 Flavonoid IFS medium borderline
Ccusscaffold_50132250 Flavonoid IFS low borderline
Ccusscaffold_50142010 Flavonoid IFS medium borderline
Ccusscaffold_50143300 Flavonoid IFS medium borderline
Ccusscaffold_50147380 Flavonoid IFS medium borderline
Ccusscaffold_60161040 Flavonoid IFS low borderline
Ccusscaffold_60161080 Flavonoid IFS low borderline
Ccusscaffold_60167470 Flavonoid IFS low borderline
Ccusscaffold_60167480 Flavonoid IFS low borderline
Ccusscaffold_60167560 Flavonoid IFS low borderline
Ccusscaffold_60167590 Flavonoid IFS low borderline
Ccusscaffold_60172840 Flavonoid IFS low borderline
Ccusscaffold_60172860 Flavonoid IFS low borderline
Ccusscaffold_60182540 Flavonoid IFS low borderline
Ccusscaffold_60183740 Flavonoid IFS medium borderline
Ccusscaffold_60183770 Flavonoid IFS medium borderline
Ccusscaffold_60186380 Flavonoid IFS medium borderline
Ccusscaffold_60186400 Flavonoid IFS medium borderline
Ccusscaffold_60192810 Flavonoid IFS low borderline
Ccusscaffold_60194290 Flavonoid IFS medium borderline
Ccusscaffold_60196950 Flavonoid IFS medium borderline
Ccusscaffold_70211330 Flavonoid IFS medium borderline
Ccusscaffold_80219460 Flavonoid IFS low borderline
Ccusscaffold_90243510 Flavonoid IFS low borderline
Ccusscaffold_90245900 Flavonoid IFS low borderline
Ccusscaffold_90245910 Flavonoid IFS low borderline
Ccusscaffold_90247340 Flavonoid IFS low borderline
Ccusscaffold_90269120 Flavonoid IFS medium borderline
Ccusscaffold_100025930 Flavonoid PAL medium pass
Ccusscaffold_100029600 Flavonoid PAL medium pass
Ccusscaffold_100036000 Flavonoid PAL medium pass
Ccusscaffold_110050360 Flavonoid PAL high pass
Ccusscaffold_110050390 Flavonoid PAL high pass
Ccusscaffold_110050420 Flavonoid PAL high pass
Ccusscaffold_110053300 Flavonoid PAL high pass
Ccusscaffold_110053340 Flavonoid PAL high pass
Ccusscaffold_110053370 Flavonoid PAL medium pass
Ccusscaffold_110053410 Flavonoid PAL high pass
Ccusscaffold_130065100 Flavonoid PAL low borderline
Ccusscaffold_30087060 Flavonoid PAL high pass
Ccusscaffold_40103360 Flavonoid PAL high pass
Ccusscaffold_50143370 Flavonoid PAL low borderline
Ccusscaffold_50143380 Flavonoid PAL medium pass
Ccusscaffold_70201000 Flavonoid PAL high pass
Ccusscaffold_70201050 Flavonoid PAL high pass