Ginkgo biloba (ginkgo_biloba)
Imported from atlas release summary for Ginkgo biloba.
1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1873
Candidate Genes
C4H
7.07%
C3'H/CYP98A
6.98%
CYP76
4.81%
BAHD
4.61%
4CL
4.31%
IFS
4.29%
UGT
3.63%
POD
3.61%
Other Families
60.68%
More Families (96)
7DLGT
161
3.5%
UFGT
159
3.46%
T3O
157
3.42%
DWF4/CYP90B1
155
3.37%
F3H
138
3.0%
BR6OX2/CYP85A2
97
2.11%
F3'H/CYP75B
91
1.98%
CODM/T6ODM
82
1.78%
CAD
74
1.61%
NMT
69
1.5%
TRI/TRII
62
1.35%
STR
61
1.33%
H6H
59
1.28%
IFR
51
1.11%
HCT
51
1.11%
T16H
50
1.09%
CAS
50
1.09%
COMT
46
1.0%
LAC
45
0.98%
G8O/G8H
43
0.94%
SGD
40
0.87%
RAS
40
0.87%
TPS
40
0.87%
PAL
39
0.85%
SMT1/SMT2/SMT3
39
0.85%
ANR
38
0.83%
GES
36
0.78%
IO
33
0.72%
PYKS
33
0.72%
CCR
30
0.65%
SLS
29
0.63%
PMT
28
0.61%
CPD/CYP90A1
28
0.61%
16OMT
27
0.59%
COR
27
0.59%
CSE
27
0.59%
GS
26
0.57%
TAT
26
0.57%
F3'5'H/CYP75A
25
0.54%
FNS
24
0.52%
CYP719
21
0.46%
8HGO
19
0.41%
HMGR
19
0.41%
CYP71
19
0.41%
CYP90D1
18
0.39%
7DLH
17
0.37%
DFR
17
0.37%
CHS
17
0.37%
BR6OX1/CYP85A1
17
0.37%
LAMT
16
0.35%
ANS/LDOX
16
0.35%
NCS
15
0.33%
ISY
13
0.28%
F5H/CYP84A
12
0.26%
ROT3/CYP90C1
12
0.26%
CYP51G1
11
0.24%
BBE
10
0.22%
CCoAOMT
10
0.22%
SQS/FDFT1
10
0.22%
FPPS
10
0.22%
GGPPS
10
0.22%
AACT
10
0.22%
6OMT_4OMT_SOMT
9
0.2%
MPO
8
0.17%
CNMT
8
0.17%
CPR
8
0.17%
CYP80B1
7
0.15%
SQE
7
0.15%
HMGS
7
0.15%
TDC
6
0.13%
HPPR
6
0.13%
MVD
6
0.13%
ADC
5
0.11%
ODC
5
0.11%
TYDC_DDC
5
0.11%
HDR/IspH
5
0.11%
PMK
5
0.11%
MVK
4
0.09%
DXS
4
0.09%
CHI
3
0.07%
SMO1/SMO2
3
0.07%
XMT_MXMT_DXMT
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DET2
2
0.04%
FK
2
0.04%
CMK/IspE
2
0.04%
MCT/IspD
2
0.04%
HDS/IspG
2
0.04%
FLS
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 479 | 19 | BAHD (173) | View species results |
| Alkaloid pathway | 426 | 21 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 403 | 10 | POD (161) | View species results |
| Flavonoid pathway | 260 | 10 | UFGT (149) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (109) | View species results |
| Steroid pathway | 94 | 12 | CAS (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1906 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 303 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gbil09G0003100.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil09G0003110.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil09G0003350.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil09G0003360.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil09G0003370.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil09G0004410.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Gbil09G0004490.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Gbil09G0005850.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Gbil09G0007620.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Gbil09G0007630.1 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| Gbil09G0011610.1 | Terpenoid | BAHD | low | borderline | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| Gbil09G0013030.1 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| Gbil09G0015620.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Gbil09G0016400.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Gbil09G0016490.1 | Terpenoid | BAHD | medium | pass | BAHD__00063__sp_Q93VV0_ZDHC6_ARATH |
| Gbil09G0018370.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Gbil09G0019830.1 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Gbil09G0019840.1 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Gbil09G0022340.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Gbil09G0022370.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Gbil10G0002970.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Gbil10G0004420.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Gbil10G0005440.1 | Terpenoid | BAHD | medium | pass | BAHD__00022__sp_K7PEY4_RAM2_MEDTR |
| Gbil10G0007820.1 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| Gbil10G0011640.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Gbil10G0011650.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Gbil10G0011780.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil10G0012020.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Gbil10G0013250.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Gbil10G0014780.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Gbil10G0014790.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Gbil10G0015130.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Gbil10G0016120.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Gbil10G0016130.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Gbil11G0001150.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Gbil11G0001560.1 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Gbil11G0002910.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Gbil11G0003000.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Gbil11G0004040.1 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| Gbil11G0009730.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Gbil11G0011410.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Gbil11G0012350.1 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| Gbil11G0013310.1 | Terpenoid | BAHD | medium | pass | BAHD__00031__sp_P0DO25_AT9_ACTDE |
| Gbil11G0014960.1 | Terpenoid | BAHD | medium | pass | BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ |
| Gbil11G0015040.1 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| Gbil11G0015770.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Gbil11G0017530.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Gbil11G0017540.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Gbil12G0003010.1 | Terpenoid | BAHD | low | borderline | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| Gbil12G0004060.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |