Ginkgo biloba (ginkgo_biloba)
Imported from atlas release summary for Ginkgo biloba.
1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1873
Candidate Genes
C4H
7.07%
C3'H/CYP98A
6.98%
CYP76
4.81%
BAHD
4.61%
4CL
4.31%
IFS
4.29%
UGT
3.63%
POD
3.61%
Other Families
60.68%
More Families (96)
7DLGT
161
3.5%
UFGT
159
3.46%
T3O
157
3.42%
DWF4/CYP90B1
155
3.37%
F3H
138
3.0%
BR6OX2/CYP85A2
97
2.11%
F3'H/CYP75B
91
1.98%
CODM/T6ODM
82
1.78%
CAD
74
1.61%
NMT
69
1.5%
TRI/TRII
62
1.35%
STR
61
1.33%
H6H
59
1.28%
IFR
51
1.11%
HCT
51
1.11%
T16H
50
1.09%
CAS
50
1.09%
COMT
46
1.0%
LAC
45
0.98%
G8O/G8H
43
0.94%
SGD
40
0.87%
RAS
40
0.87%
TPS
40
0.87%
PAL
39
0.85%
SMT1/SMT2/SMT3
39
0.85%
ANR
38
0.83%
GES
36
0.78%
IO
33
0.72%
PYKS
33
0.72%
CCR
30
0.65%
SLS
29
0.63%
PMT
28
0.61%
CPD/CYP90A1
28
0.61%
16OMT
27
0.59%
COR
27
0.59%
CSE
27
0.59%
GS
26
0.57%
TAT
26
0.57%
F3'5'H/CYP75A
25
0.54%
FNS
24
0.52%
CYP719
21
0.46%
8HGO
19
0.41%
HMGR
19
0.41%
CYP71
19
0.41%
CYP90D1
18
0.39%
7DLH
17
0.37%
DFR
17
0.37%
CHS
17
0.37%
BR6OX1/CYP85A1
17
0.37%
LAMT
16
0.35%
ANS/LDOX
16
0.35%
NCS
15
0.33%
ISY
13
0.28%
F5H/CYP84A
12
0.26%
ROT3/CYP90C1
12
0.26%
CYP51G1
11
0.24%
BBE
10
0.22%
CCoAOMT
10
0.22%
SQS/FDFT1
10
0.22%
FPPS
10
0.22%
GGPPS
10
0.22%
AACT
10
0.22%
6OMT_4OMT_SOMT
9
0.2%
MPO
8
0.17%
CNMT
8
0.17%
CPR
8
0.17%
CYP80B1
7
0.15%
SQE
7
0.15%
HMGS
7
0.15%
TDC
6
0.13%
HPPR
6
0.13%
MVD
6
0.13%
ADC
5
0.11%
ODC
5
0.11%
TYDC_DDC
5
0.11%
HDR/IspH
5
0.11%
PMK
5
0.11%
MVK
4
0.09%
DXS
4
0.09%
CHI
3
0.07%
SMO1/SMO2
3
0.07%
XMT_MXMT_DXMT
2
0.04%
DWF1
2
0.04%
CPI1
2
0.04%
DET2
2
0.04%
FK
2
0.04%
CMK/IspE
2
0.04%
MCT/IspD
2
0.04%
HDS/IspG
2
0.04%
FLS
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
IDI
1
0.02%
MDS/IspF
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 479 | 19 | BAHD (173) | View species results |
| Alkaloid pathway | 426 | 21 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 403 | 10 | POD (161) | View species results |
| Flavonoid pathway | 260 | 10 | UFGT (149) | View species results |
| Rosmarinic acid pathway | 211 | 7 | C4H (109) | View species results |
| Steroid pathway | 94 | 12 | CAS (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1906 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 303 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Gbil01G0001470.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0001480.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0011110.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Gbil01G0018000.1 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| Gbil01G0022580.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0023190.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0023200.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0023210.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0023220.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0023270.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0023280.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Gbil01G0028280.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Gbil02G0000740.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Gbil02G0000750.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Gbil02G0002840.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Gbil02G0002850.1 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Gbil02G0003880.1 | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| Gbil02G0003890.1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Gbil02G0004340.1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Gbil02G0008640.1 | Terpenoid | UGT | medium | pass | UGT__00045__sp_K4GKX2_73C10_BARVU |
| Gbil02G0009810.1 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Gbil02G0012210.1 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Gbil02G0012220.1 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Gbil02G0014650.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Gbil02G0016090.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Gbil02G0019680.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Gbil02G0019730.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Gbil02G0021280.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0000050.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Gbil03G0001210.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0001220.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0001230.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0001240.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0001250.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0001260.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0001270.1 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| Gbil03G0001280.1 | Terpenoid | UGT | medium | pass | UGT__00114__sp_U3THC0_FG2KI_SOYBN |
| Gbil03G0022110.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Gbil03G0022120.1 | Terpenoid | UGT | medium | pass | UGT__00037__sp_I1LCI8_FG2KO_SOYBN |
| Gbil03G0023150.1 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Gbil03G0024000.1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Gbil03G0024010.1 | Terpenoid | UGT | medium | pass | UGT__00037__sp_I1LCI8_FG2KO_SOYBN |
| Gbil03G0024200.1 | Terpenoid | UGT | medium | pass | UGT__00043__sp_K4GHS2_73C13_BARVU |
| Gbil04G0007960.1 | Terpenoid | UGT | medium | pass | UGT__00018__sp_A0A224AM54_708G1_CITJP |
| Gbil04G0007970.1 | Terpenoid | UGT | medium | pass | UGT__00018__sp_A0A224AM54_708G1_CITJP |
| Gbil04G0007980.1 | Terpenoid | UGT | medium | pass | UGT__00018__sp_A0A224AM54_708G1_CITJP |
| Gbil04G0008170.1 | Terpenoid | UGT | low | borderline | UGT__00024__sp_B3VI56_U91D2_STERE |
| Gbil04G0014540.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Gbil04G0014550.1 | Terpenoid | UGT | medium | pass | UGT__00042__sp_K4GHR9_UGT1_BARVU |
| Gbil05G0000570.1 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |