PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Gbil01G0006910.1 Flavonoid 4CL medium pass
Gbil01G0006920.1 Flavonoid 4CL medium pass
Gbil01G0006930.1 Flavonoid 4CL medium pass
Gbil01G0006940.1 Flavonoid 4CL medium pass
Gbil01G0008510.1 Flavonoid 4CL medium pass
Gbil01G0010760.1 Flavonoid 4CL medium pass
Gbil01G0019100.1 Flavonoid 4CL medium pass
Gbil01G0019240.1 Flavonoid 4CL medium pass
Gbil01G0019540.1 Flavonoid 4CL medium pass
Gbil01G0019550.1 Flavonoid 4CL medium pass
Gbil01G0020040.1 Flavonoid 4CL medium pass
Gbil01G0028600.1 Flavonoid 4CL low borderline
Gbil02G0005880.1 Flavonoid 4CL low borderline
Gbil02G0006650.1 Flavonoid 4CL medium pass
Gbil02G0006660.1 Flavonoid 4CL medium pass
Gbil02G0008360.1 Flavonoid 4CL medium pass
Gbil02G0008780.1 Flavonoid 4CL medium pass
Gbil02G0013400.1 Flavonoid 4CL medium pass
Gbil03G0000320.1 Flavonoid 4CL low borderline
Gbil03G0014910.1 Flavonoid 4CL medium pass
Gbil03G0014920.1 Flavonoid 4CL medium pass
Gbil03G0014930.1 Flavonoid 4CL medium pass
Gbil03G0014940.1 Flavonoid 4CL medium pass
Gbil03G0014970.1 Flavonoid 4CL low borderline
Gbil03G0020530.1 Flavonoid 4CL low borderline
Gbil04G0000780.1 Flavonoid 4CL low borderline
Gbil04G0012510.1 Flavonoid 4CL medium pass
Gbil04G0017000.1 Flavonoid 4CL medium pass
Gbil06G0002990.1 Flavonoid 4CL medium pass
Gbil06G0003000.1 Flavonoid 4CL medium pass
Gbil06G0004180.1 Flavonoid 4CL medium pass
Gbil06G0004190.1 Flavonoid 4CL medium pass
Gbil06G0004200.1 Flavonoid 4CL medium pass
Gbil06G0006040.1 Flavonoid 4CL low borderline
Gbil06G0006060.1 Flavonoid 4CL low borderline
Gbil07G0018380.1 Flavonoid 4CL low borderline
Gbil08G0001770.1 Flavonoid 4CL low borderline
Gbil08G0001790.1 Flavonoid 4CL low borderline
Gbil08G0001800.1 Flavonoid 4CL low borderline
Gbil08G0010100.1 Flavonoid 4CL medium pass
Gbil08G0016320.1 Flavonoid 4CL medium pass
Gbil09G0008400.1 Flavonoid 4CL medium pass
Gbil09G0009900.1 Flavonoid 4CL medium pass
Gbil09G0009910.1 Flavonoid 4CL medium pass
Gbil09G0017180.1 Flavonoid 4CL medium pass
Gbil09G0018330.1 Flavonoid 4CL low borderline
Gbil09G0020920.1 Flavonoid 4CL low borderline
Gbil10G0000940.1 Flavonoid 4CL medium pass
Gbil10G0000950.1 Flavonoid 4CL medium pass
Gbil10G0003200.1 Flavonoid 4CL low borderline