PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
Gbil01G0015970.1 Steroid CPD/CYP90A1 low borderline
Gbil02G0009140.1 Steroid CPD/CYP90A1 medium borderline
Gbil02G0009150.1 Steroid CPD/CYP90A1 medium borderline
Gbil02G0013380.1 Steroid CPD/CYP90A1 medium borderline
Gbil02G0013390.1 Steroid CPD/CYP90A1 medium borderline
Gbil03G0000370.1 Steroid CPD/CYP90A1 medium borderline
Gbil03G0000390.1 Steroid CPD/CYP90A1 medium borderline
Gbil03G0016800.1 Steroid CPD/CYP90A1 low borderline
Gbil04G0014490.1 Steroid CPD/CYP90A1 low borderline
Gbil05G0006830.1 Steroid CPD/CYP90A1 medium borderline
Gbil05G0007100.1 Steroid CPD/CYP90A1 low borderline
Gbil05G0010460.1 Steroid CPD/CYP90A1 low borderline
Gbil05G0013450.1 Steroid CPD/CYP90A1 medium borderline
Gbil05G0013460.1 Steroid CPD/CYP90A1 medium borderline
Gbil05G0013470.1 Steroid CPD/CYP90A1 medium borderline
Gbil05G0013490.1 Steroid CPD/CYP90A1 low borderline
Gbil05G0013500.1 Steroid CPD/CYP90A1 low borderline
Gbil06G0012230.1 Steroid CPD/CYP90A1 medium borderline
Gbil08G0000770.1 Steroid CPD/CYP90A1 medium borderline
Gbil10G0019280.1 Steroid CPD/CYP90A1 low borderline
Gbil11G0002150.1 Steroid CPD/CYP90A1 medium borderline
Gbil11G0009590.1 Steroid CPD/CYP90A1 medium borderline
Gbil12G0004420.1 Steroid CPD/CYP90A1 low borderline
Gbil12G0004480.1 Steroid CPD/CYP90A1 low borderline
Gbil12G0007570.1 Steroid CPD/CYP90A1 low borderline
Gbil12G0007600.1 Steroid CPD/CYP90A1 low borderline
Gbil12G0007620.1 Steroid CPD/CYP90A1 low borderline
Gbilctg320800001830.1 Steroid CPD/CYP90A1 medium borderline