PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Gbil01G0018780.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil01G0025400.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil01G0027900.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil01G0027910.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil01G0027920.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil02G0005440.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil02G0005450.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil02G0005460.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil02G0018410.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil03G0004800.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil04G0008980.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil04G0010300.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil05G0009890.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil06G0004360.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil06G0015650.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil06G0015660.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil07G0004800.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil07G0017370.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil08G0015730.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil08G0015740.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil08G0017270.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil09G0017430.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil10G0003330.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil10G0003340.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Gbil10G0016660.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil12G0008120.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Gbil12G0008160.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL