PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status
Gbil06G0007370.1 Terpenoid CYP76 medium pass
Gbil06G0007730.1 Terpenoid CYP76 medium borderline
Gbil06G0007740.1 Terpenoid CYP76 medium borderline
Gbil06G0007770.1 Terpenoid CYP76 medium borderline
Gbil06G0018350.1 Terpenoid CYP76 low borderline
Gbil06G0018360.1 Terpenoid CYP76 low borderline
Gbil06G0018380.1 Terpenoid CYP76 low borderline
Gbil06G0018420.1 Terpenoid CYP76 low borderline
Gbil06G0018450.1 Terpenoid CYP76 low borderline
Gbil06G0022360.1 Terpenoid CYP76 low borderline
Gbil07G0004550.1 Terpenoid CYP76 medium borderline
Gbil07G0016430.1 Terpenoid CYP76 low borderline
Gbil07G0017940.1 Terpenoid CYP76 medium borderline
Gbil07G0020050.1 Terpenoid CYP76 medium borderline
Gbil08G0000840.1 Terpenoid CYP76 low borderline
Gbil08G0004010.1 Terpenoid CYP76 medium borderline
Gbil08G0004020.1 Terpenoid CYP76 medium borderline
Gbil08G0004030.1 Terpenoid CYP76 medium borderline
Gbil08G0004040.1 Terpenoid CYP76 medium borderline
Gbil08G0004050.1 Terpenoid CYP76 medium borderline
Gbil08G0005100.1 Terpenoid CYP76 medium pass
Gbil08G0006940.1 Terpenoid CYP76 low borderline
Gbil08G0006950.1 Terpenoid CYP76 medium pass
Gbil08G0006960.1 Terpenoid CYP76 medium pass
Gbil08G0011590.1 Terpenoid CYP76 medium pass
Gbil08G0011680.1 Terpenoid CYP76 low borderline
Gbil08G0013420.1 Terpenoid CYP76 medium borderline
Gbil08G0016570.1 Terpenoid CYP76 low borderline
Gbil08G0017510.1 Terpenoid CYP76 medium pass
Gbil08G0017640.1 Terpenoid CYP76 medium pass
Gbil08G0017650.1 Terpenoid CYP76 medium pass
Gbil08G0017670.1 Terpenoid CYP76 medium pass
Gbil08G0017720.1 Terpenoid CYP76 low borderline
Gbil08G0018250.1 Terpenoid CYP76 medium pass
Gbil08G0018500.1 Terpenoid CYP76 low borderline
Gbil08G0018730.1 Terpenoid CYP76 low borderline
Gbil09G0000890.1 Terpenoid CYP76 low borderline
Gbil09G0008690.1 Terpenoid CYP76 low borderline
Gbil09G0011050.1 Terpenoid CYP76 low borderline
Gbil09G0012730.1 Terpenoid CYP76 low borderline
Gbil09G0013440.1 Terpenoid CYP76 medium borderline
Gbil09G0013450.1 Terpenoid CYP76 medium borderline
Gbil09G0013460.1 Terpenoid CYP76 medium borderline
Gbil09G0021210.1 Terpenoid CYP76 medium borderline
Gbil10G0001090.1 Terpenoid CYP76 medium borderline
Gbil10G0001100.1 Terpenoid CYP76 medium borderline
Gbil10G0004560.1 Terpenoid CYP76 medium pass
Gbil10G0004570.1 Terpenoid CYP76 medium borderline
Gbil10G0004580.1 Terpenoid CYP76 medium borderline
Gbil10G0010250.1 Terpenoid CYP76 medium pass