PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Gbil07G0001170.1 Steroid DWF4/CYP90B1 medium borderline
Gbil07G0001180.1 Steroid DWF4/CYP90B1 medium borderline
Gbil07G0001190.1 Steroid DWF4/CYP90B1 medium borderline
Gbil07G0004550.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0000710.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0004010.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0004020.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0004030.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0004040.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0004050.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0008150.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0008690.1 Steroid DWF4/CYP90B1 low borderline
Gbil08G0008700.1 Steroid DWF4/CYP90B1 low borderline
Gbil09G0013440.1 Steroid DWF4/CYP90B1 low borderline
Gbil09G0013450.1 Steroid DWF4/CYP90B1 low borderline
Gbil09G0013460.1 Steroid DWF4/CYP90B1 low borderline
Gbil09G0014740.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0001090.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0001100.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0003830.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0004560.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0004570.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0004580.1 Steroid DWF4/CYP90B1 low borderline
Gbil10G0004760.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0004770.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0006210.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0006860.1 Steroid DWF4/CYP90B1 medium borderline
Gbil10G0020270.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0000150.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0000160.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0000170.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0001710.1 Steroid DWF4/CYP90B1 medium pass
Gbil11G0001920.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0001930.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0001940.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0002130.1 Steroid DWF4/CYP90B1 medium borderline
Gbil11G0002140.1 Steroid DWF4/CYP90B1 medium borderline
Gbil11G0002200.1 Steroid DWF4/CYP90B1 medium borderline
Gbil11G0005360.1 Steroid DWF4/CYP90B1 low borderline
Gbil11G0005370.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0001530.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0004430.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0004470.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0005060.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007580.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007610.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007640.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0007650.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0016690.1 Steroid DWF4/CYP90B1 low borderline
Gbil12G0018550.1 Steroid DWF4/CYP90B1 low borderline